FIBRA_08712 (Fibroporia radiculosa)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 FIBRA_08712 T014947_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NCU01238
M01669_2.00
Neurospora crassa
NYATNNNN

NNNNATRN
PBM
Weirauch et al.(2014)
pTH8942
0.443 0.471
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CCM06448 ARID/BRIGHT 227 312

Links

Other ARID/BRIGHT family TFs
Other Fibroporia radiculosa TFs

179 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_13961 Aegilops tauschii F775_13961 I 0.000
AMTR_s00018p00071850 Amborella trichopoda AMTR_s00018p00071850 I 0.000
Aquca_014_00255 Aquilegia coerulea Aquca_014_00255 I 0.000
fgenesh2_kg.3__1353__AT3G12910.1 Arabidopsis lyrata fgenesh2_kg.3__1353__AT3G12910.1 I 0.000
ANAC011 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002601 I 0.000
ATAF1 Arabidopsis lyrata scaffold_100066.1 I 0.000
AT3G12910 Arabidopsis thaliana AT3G12910 D 0.000
NAC002 Arabidopsis thaliana AT1G01720 D 0.000
NAC026 Arabidopsis thaliana AT1G62700 I 0.000
Bostr.3640s0064 Boechera stricta Bostr.3640s0064 I 0.000
Bostr.5325s0094 Boechera stricta Bostr.5325s0094 I 0.000
BRADI3G13630 Brachypodium distachyon BRADI3G13630 N 0.000
BRADI4G37327 Brachypodium distachyon BRADI4G37327 I 0.000
Bo3g065200 Brassica oleracea Bo3g065200 I 0.000
Bo1g138800 Brassica oleracea Bo1g138800 I 0.000
Bo5g001100 Brassica oleracea Bo5g001100 I 0.000
Bra033239 Brassica rapa Bra033239 I 0.000
Bra034719 Brassica rapa Bra034719 I 0.000
Bra039353 Brassica rapa Bra039353 I 0.000
PK05686.1 Cannabis sativa PK05686.1 I 0.000
Cagra.1968s0112 Capsella grandiflora Cagra.1968s0112 I 0.000
Cagra.5641s0055 Capsella grandiflora Cagra.5641s0055 I 0.000
Cagra.7865s0013 Capsella grandiflora Cagra.7865s0013 I 0.000
Carubv10014270m.g Capsella rubella Carubv10014270m.g I 0.000
Carubv10009926m.g Capsella rubella Carubv10009926m.g I 0.000
evm.TU.contig_29561 Carica papaya evm.TU.contig_29561 I 0.000
Ca_13571 Cicer arietinum Ca_13571 I 0.000
Cla011742 Citrullus lanatus Cla011742 I 0.000
Cla023594 Citrullus lanatus Cla023594 I 0.000
Cucsa.119310 Cucumis sativus Cucsa.119310 N 0.000
Eucgr.F01463 Eucalyptus grandis Eucgr.F01463 I 0.000
Eucgr.K02303 Eucalyptus grandis Eucgr.K02303 I 0.000
Eucgr.J00531 Eucalyptus grandis Eucgr.J00531 I 0.000
Thhalv10012158m.g Eutrema salsugineum Thhalv10012158m.g I 0.000
Thhalv10023502m.g Eutrema salsugineum Thhalv10023502m.g I 0.000
Thhalv10021225m.g Eutrema salsugineum Thhalv10021225m.g I 0.000
GLYMA14G24220 Glycine max GLYMA14G24220 I 0.000
Gorai.010G051900 Gossypium raimondii Gorai.010G051900 I 0.000
Gorai.010G236700 Gossypium raimondii Gorai.010G236700 I 0.000
Gorai.006G088400 Gossypium raimondii Gorai.006G088400 I 0.000
Gorai.010G171100 Gossypium raimondii Gorai.010G171100 I 0.000
MLOC_37364 Hordeum vulgare MLOC_37364 I 0.000
MLOC_37843 Hordeum vulgare MLOC_37843 I 0.000
LPERR09G14720 Leersia perrieri LPERR09G14720 I 0.000
cassava23439.valid.m1 Manihot esculenta cassava23439.valid.m1 I 0.000
MTR_2g068880 Medicago truncatula MTR_2g068880 I 0.000
MTR_2g068920 Medicago truncatula MTR_2g068920 I 0.000
mgf002365m Mimulus guttatus mgf002365m I 0.000
mgf015836m Mimulus guttatus mgf015836m I 0.000
mgf013201m Mimulus guttatus mgf013201m I 0.000
mgf004020m Mimulus guttatus mgf004020m I 0.000
GSMUA_Achr10G08120_001 Musa acuminata GSMUA_Achr10G08120_001 I 0.000
GSMUA_Achr11G16860_001 Musa acuminata GSMUA_Achr11G16860_001 I 0.000
GSMUA_Achr4G32010_001 Musa acuminata GSMUA_Achr4G32010_001 I 0.000
GSMUA_Achr6G31580_001 Musa acuminata GSMUA_Achr6G31580_001 I 0.000
GSMUA_Achr9G10040_001 Musa acuminata GSMUA_Achr9G10040_001 I 0.000
OB09G25590 Oryza brachyantha OB09G25590 I 0.000
ORGLA09G0151800 Oryza glaberrima ORGLA09G0151800 I 0.000
OGLUM09G19480 Oryza glumaepatula OGLUM09G19480 I 0.000
BGIOSGA031230 Oryza indica BGIOSGA031230 I 0.000
OMERI09G14170 Oryza meridionalis OMERI09G14170 I 0.000
ONIVA09G20130 Oryza nivara ONIVA09G20130 I 0.000
Pavir.Ia03443 Panicum virgatum Pavir.Ia03443 I 0.000
Pavir.Ea03621 Panicum virgatum Pavir.Ea03621 I 0.000
Pavir.Ba01386 Panicum virgatum Pavir.Ba01386 I 0.000
Pavir.Bb02626 Panicum virgatum Pavir.Bb02626 I 0.000
Pavir.J38855 Panicum virgatum Pavir.J38855 I 0.000
Pavir.Ib01528 Panicum virgatum Pavir.Ib01528 I 0.000
e_gw1.5.134.1 Physcomitrella patens e_gw1.5.134.1 I 0.000
e_gw1.117.35.1 Physcomitrella patens e_gw1.117.35.1 I 0.000
POPTR_0003s14950 Populus trichocarpa POPTR_0003s14950 I 0.000
POPTR_0004s04920 Populus trichocarpa POPTR_0004s04920 I 0.000
PRUPE_ppa017765mg Prunus persica PRUPE_ppa017765mg I 0.000
SapurV1A.0059s0580 Salix purpurea SapurV1A.0059s0580 I 0.000
SapurV1A.0076s0070 Salix purpurea SapurV1A.0076s0070 I 0.000
SapurV1A.0093s0260 Salix purpurea SapurV1A.0093s0260 I 0.000
SapurV1A.0365s0200 Salix purpurea SapurV1A.0365s0200 I 0.000
SELMODRAFT_71307 Selaginella moellendorffii SELMODRAFT_71307 I 0.000
SELMODRAFT_86855 Selaginella moellendorffii SELMODRAFT_86855 I 0.000
Si022714m.g Setaria italica Si022714m.g I 0.000
Si032702m.g Setaria italica Si032702m.g I 0.000
Si036303m.g Setaria italica Si036303m.g I 0.000
Solyc11g017470.1 Solanum lycopersicum Solyc11g017470.1 I 0.000
Solyc06g074170.2 Solanum lycopersicum Solyc06g074170.2 I 0.000
Solyc11g068750.1 Solanum lycopersicum Solyc11g068750.1 I 0.000
PGSC0003DMG400039898 Solanum tuberosum PGSC0003DMG400039898 I 0.000
PGSC0003DMG400019615 Solanum tuberosum PGSC0003DMG400019615 I 0.000
Sb02g032230 Sorghum bicolor Sb02g032230 I 0.000
Sb08g022560 Sorghum bicolor Sb08g022560 I 0.000
TCM_035160 Theobroma cacao TCM_035160 I 0.000
TCM_029321 Theobroma cacao TCM_029321 I 0.000
Traes_7BL_8A5D12EE1 Triticum aestivum Traes_7BL_8A5D12EE1 I 0.000
Traes_5DL_B69423A67 Triticum aestivum Traes_5DL_B69423A67 I 0.000
Traes_5BL_8BE382FE3 Triticum aestivum Traes_5BL_8BE382FE3 I 0.000
Traes_7DL_D05DA373C Triticum aestivum Traes_7DL_D05DA373C I 0.000
TRIUR3_18561 Triticum urartu TRIUR3_18561 I 0.000
TRIUR3_13805 Triticum urartu TRIUR3_13805 I 0.000
TRIUR3_29260 Triticum urartu TRIUR3_29260 I 0.000
VIT_19s0027g00840 Vitis vinifera VIT_19s0027g00840 I 0.000
VIT_19s0027g00910 Vitis vinifera VIT_19s0027g00910 I 0.000
GRMZM2G052239 Zea mays GRMZM2G052239 I 0.000