LPERR02G24480 (Leersia perrieri)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 LPERR02G24480 T015154_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ARID3
M06695_2.00
Arabidopsis thaliana
AAWWHNAAATYAAWW

WWTTRATTTNDWWTT
Dap-seq
OMalley et al.(2016)
AT2G17410_col_a
0.690 0.741
ARID6
M06694_2.00
Arabidopsis thaliana
HAATTRAWTTN

NAAWTYAATTD
Dap-seq
OMalley et al.(2016)
AT1G20910_col_a
0.595 0.706
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LPERR02G24480.1 ARID/BRIGHT 149 234
LPERR02G24480.2 ARID/BRIGHT 149 234

Links

Other ARID/BRIGHT family TFs
Other Leersia perrieri TFs

155 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
HpaG800557 Hyaloperonospora arabidopsidis HpaG800557 N 0.000
estExt_fgenesh1_pg.C_00107 Phytophthora capsici estExt_fgenesh1_pg.C_00107 N 0.000
estExt_fgenesh1_kg.C_00378 Phytophthora capsici estExt_fgenesh1_kg.C_00378 N 0.000
PITG_05742 Phytophthora infestans PITG_05742 N 0.000
PITG_05734 Phytophthora infestans PITG_05734 N 0.000
fgenesh_scip_prom.46568.2994 Phytophthora kernoviae fgenesh_scip_prom.46568.2994 N 0.000
fgenesh_scip_prom.46568.2990 Phytophthora kernoviae fgenesh_scip_prom.46568.2990 N 0.000
fgenesh_scip_prom.28083.8513 Phytophthora lateralis fgenesh_scip_prom.28083.8513 N 0.000
fgenesh_scip_prom.28083.7634 Phytophthora lateralis fgenesh_scip_prom.28083.7634 N 0.000
F443_02170 Phytophthora parasitica F443_02170 N 0.000
F443_00235 Phytophthora parasitica F443_00235 N 0.000
Phyra75938 Phytophthora ramorum Phyra75938 N 0.000
Phyra75932 Phytophthora ramorum Phyra75932 N 0.000
Physo132525 Phytophthora sojae Physo132525 N 0.000
maker-pag1_scaffold_241-snap-gene-0.8 Pythium aphanidermatum maker-pag1_scaffold_241-snap-gene-0.8 N 0.000
maker-pag1_scaffold_241-snap-gene-0.5 Pythium aphanidermatum maker-pag1_scaffold_241-snap-gene-0.5 N 0.000
maker-par_contig_498-fgenesh-gene-0.0 Pythium arrhenomanes maker-par_contig_498-fgenesh-gene-0.0 N 0.000
maker-pir_contig_962-fgenesh-gene-0.0 Pythium irregulare maker-pir_contig_962-fgenesh-gene-0.0 N 0.000
maker-pir_contig_677-snap-gene-0.4 Pythium irregulare maker-pir_contig_677-snap-gene-0.4 N 0.000
snap-piw_contig_1471-abinit-gene-0.10 Pythium iwayamai snap-piw_contig_1471-abinit-gene-0.10 N 0.000
maker-piw_contig_1009-fgenesh-gene-0.1 Pythium iwayamai maker-piw_contig_1009-fgenesh-gene-0.1 N 0.000
PYU1_G004965 Pythium ultimum PYU1_G004965 N 0.000
PYU1_G005004 Pythium ultimum PYU1_G005004 N 0.000
maker-pve_contig_244-fgenesh-gene-0.5 Pythium vexans maker-pve_contig_244-fgenesh-gene-0.5 N 0.000
maker-pve_contig_244-fgenesh-gene-0.3 Pythium vexans maker-pve_contig_244-fgenesh-gene-0.3 N 0.000
SPRG_17213 Saprolegnia parasitica SPRG_17213 N 0.000
SPRG_01851 Saprolegnia parasitica SPRG_01851 N 0.000