CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
OPUNC06G25880
(
Oryza punctata
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01388 (ARID)
IPR001606
OPUNC06G25880
T015358_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OPUNC06G25880.1
ARID/BRIGHT
86
172
DPDTFLLDYHRFLRAQAHHRGRKKALMPKSPALSDGRPLDLCRLFHAVKRFGGYDGACAGKRWADVLRLDGSNKCQPGEVESDDQPS
OPUNC06G25880.2
ARID/BRIGHT
86
180
DPDTFLLDYHRFLRAQAHHRGRKKALMPKSPALSDGRPLDLCRLFHAVKRFGGYDGACAGKRWADVLRLVGDKAPRHVSEHIIAQIYYEHLYQYE
Links
Other
ARID/BRIGHT
family TFs
Other
Oryza punctata
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OBART06G28370
Oryza barthii
OBART06G28370
N
0.678
OGLUM06G29760
Oryza glumaepatula
OGLUM06G29760
N
0.678
BGIOSGA020494
Oryza indica
BGIOSGA020494
N
0.678
ONIVA06G31490
Oryza nivara
ONIVA06G31490
N
0.678
ORGLA06G0289500
Oryza glaberrima
ORGLA06G0289500
N
0.678
OS06G0731600
Oryza sativa
OS06G0731600
N
0.678
ORUFI06G30290
Oryza rufipogon
ORUFI06G30290
N
0.678
OMERI06G28260
Oryza meridionalis
OMERI06G28260
N
0.678
OLONG_013925
Oryza longistaminata
OLONG_013925
N
0.655
LPERR06G23820
Leersia perrieri
LPERR06G23820
N
0.605
OB06G36110
Oryza brachyantha
OB06G36110
N
0.586
Sb10g031260
Sorghum bicolor
Sb10g031260
N
0.565
BRADI1G29247
Brachypodium distachyon
BRADI1G29247
N
0.565
GRMZM2G466292
Zea mays
GRMZM2G466292
N
0.543
Si005667m.g
Setaria italica
Si005667m.g
N
0.493