Cucsa.323280 (Cucumis sativus)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01388 (ARID) IPR001606 Cucsa.323280 T015963_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ARID3
M06695_2.00
Arabidopsis thaliana
AAWWHNAAATYAAWW

WWTTRATTTNDWWTT
Dap-seq
OMalley et al.(2016)
AT2G17410_col_a
0.747 0.894
ARID6
M06694_2.00
Arabidopsis thaliana
HAATTRAWTTN

NAAWTYAATTD
Dap-seq
OMalley et al.(2016)
AT1G20910_col_a
0.629 0.741
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.323280.1 ARID/BRIGHT 218 303

Links

Other ARID/BRIGHT family TFs
Other Cucumis sativus TFs

154 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
COCC4DRAFT_69368 Bipolaris maydis COCC4DRAFT_69368 N 0.000
COCCADRAFT_97412 Bipolaris zeicola COCCADRAFT_97412 N 0.000
COCMIDRAFT_95290 Bipolaris oryzae COCMIDRAFT_95290 N 0.000
COCSADRAFT_173949 Bipolaris sorokiniana COCSADRAFT_173949 N 0.000
COCVIDRAFT_96245 Bipolaris victoriae COCVIDRAFT_96245 N 0.000
estExt_fgenesh1_pm.C_60144 Cochliobolus heterostrophus C5 estExt_fgenesh1_pm.C_60144 N 0.000
PTRG_00913 Pyrenophora triticirepentis PTRG_00913 N 0.000
SETTUDRAFT_156877 Setosphaeria turcica SETTUDRAFT_156877 N 0.000
SNOG_07097 Phaeosphaeria nodorum SNOG_07097 N 0.000
SNOG_07097 Stagonospora nodorum SNOG_07097 N 0.000