CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh3_pm.C_60533
(
Neurospora discreta
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
IPR001606
estExt_fgenesh3_pm.C_60533
T015979_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU03892
M01670_2.00
Neurospora crassa
HAAATTTD
HAAATTTD
PBM
Weirauch et al.(2014)
pTH8975
0.785
0.989
For this family, TFs with SR scores >
0.422
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh3_pm.C_60533
ARID/BRIGHT
19
107
EYETFIEDLRVFHEKRGTNFDPEPKMGNLTVDLLKLFKHIVEHGGYDKVSDEKLMWRKMCEGLGLMRHNAPADAYTLKQIFYKNLAAYE
Links
Other
ARID/BRIGHT
family TFs
Other
Neurospora discreta
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
THITE_135489
Thielavia terrestris
THITE_135489
I
0.785
MYCTH_2306410
Myceliophthora thermophila
MYCTH_2306410
I
0.785
SMAC_06319
Sordaria macrospora
SMAC_06319
I
0.785
NEUTE1DRAFT_124821
Neurospora tetrasperma
NEUTE1DRAFT_124821
I
0.785
CTHT_0044130
Chaetomium thermophilum
CTHT_0044130
I
0.785
CHGG_09197
Chaetomium globosum
CHGG_09197
I
0.785
NCU03892
Neurospora crassa
NCU03892
D
0.785
PODANS_4_7020
Podospora anserina
PODANS_4_7020
I
0.714
F503_08290
Ophiostoma piceae uamh
F503_08290
I
0.562
SPBR_06453
Sporothrix brasiliensis
SPBR_06453
I
0.553
HMPREF1624_00227
Sporothrix schenckii
HMPREF1624_00227
I
0.553
CMQ_6414
Grosmannia clavigera
CMQ_6414
I
0.553
VDBG_07957
Verticillium albo atrum
VDBG_07957
I
0.476
VDBG_07957
Verticillium alfalfae
VDBG_07957
I
0.476
VDAG_05527
Verticillium dahliae
VDAG_05527
I
0.476
FFUJ_04361
Fusarium fujikuroi
FFUJ_04361
I
0.425
FVEG_04045
Fusarium verticillioides
FVEG_04045
I
0.425
FOXG_06191
Fusarium oxysporum
FOXG_06191
I
0.425