CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.0301s0102
(
Capsella grandiflora
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
IPR001606
Cagra.0301s0102
T016064_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.0301s0102.1.p
ARID/BRIGHT
42
129
DKDLFMSTLVNLHSQMGTKFWIPKVRFEDMNLHKVFCKVTSHGGIEQIVREKKWKDVFDTFNFPCSQRNPIFILHVRKLYYSLLHNYE
Links
Other
ARID/BRIGHT
family TFs
Other
Capsella grandiflora
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Carubv10025228m.g
Capsella rubella
Carubv10025228m.g
N
0.785
Bostr.23794s0821
Boechera stricta
Bostr.23794s0821
N
0.703
Thhalv10017860m.g
Eutrema salsugineum
Thhalv10017860m.g
N
0.482