CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_pg.C_20279
(
Coccomyxa subellipsoidea C169
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
IPR001606
estExt_fgenesh1_pg.C_20279
T016089_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
46169
ARID/BRIGHT
1362
1448
GRERFLTLLTNWMRGVHGKFKVPIFAHQELDLYRVFWSVMDKGGYEIVSANKQWKEVCRCLGVDLRGQTSASFNMRQNYERCLFEFE
Links
Other
ARID/BRIGHT
family TFs
Other
Coccomyxa subellipsoidea C169
TFs
43 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GG.C169_S02_00415
Chlorella vulgaris
GG.C169_S02_00415
N
0.785
AZW_est_orfs.1_230_4278492:2
Micromonas pusilla
AZW_est_orfs.1_230_4278492:2
N
0.517
EuGene.0800010038
Micromonas sp RCC299
EuGene.0800010038
N
0.502
EuGene.0000140409
Micromonas pusilla
EuGene.0000140409
N
0.499
EuGene.0000010032
Micromonas pusilla
EuGene.0000010032
N
0.496
EuGene.0900010375
Micromonas sp RCC299
EuGene.0900010375
N
0.467
MESCA005201
Megaselia scalaris
MESCA005201
I
0.453
Contig1044.0.g66
Oxytricha trifallax
Contig1044.0.g66
I
0.448
OSTLU_29004
Ostreococcus lucimarinus
OSTLU_29004
N
0.437
Sakowv30017861m.g
Saccoglossus kowalevskii
Sakowv30017861m.g
I
0.427
Aqu1.213820
Amphimedon queenslandica
Aqu1.213820
I
0.426
ARID3C
Pteropus vampyrus
ENSPVAG00000014819
I
0.424
ARID3C
Pan troglodytes
ENSPTRG00000029286
I
0.424
ENSPANG00000025316
Papio anubis
ENSPANG00000025316
I
0.424
Arid3c
Rattus norvegicus
ENSRNOG00000013416
I
0.424
ENSPPYG00000020014
Pongo abelii
ENSPPYG00000020014
I
0.424
ARID3C
Sus scrofa
ENSSSCG00000010971
I
0.424
ARID3C
Ochotona princeps
ENSOPRG00000009210
I
0.424
ARID3C
Tursiops truncatus
ENSTTRG00000005673
I
0.424
ARID3C
Tupaia belangeri
ENSTBEG00000004554
I
0.424
ENSSTOG00000002820
Ictidomys tridecemlineatus
ENSSTOG00000002820
I
0.424
ENSP00000368189
Macaca fascicularis
ENSP00000368189
I
0.424
ARID3C
Otolemur garnettii
ENSOGAG00000008253
I
0.424
ARID3C
Cavia porcellus
ENSCPOG00000001541
I
0.424
ENSCSAG00000010149
Chlorocebus sabaeus
ENSCSAG00000010149
I
0.424
ARID3C
Dasypus novemcinctus
ENSDNOG00000030859
I
0.424
Arid3c
Dipodomys ordii
ENSDORG00000001723
I
0.424
ARID3C
Callithrix jacchus
ENSCJAG00000008754
I
0.424
ARID3C
Choloepus hoffmanni
ENSCHOG00000011584
I
0.424
ENSAMEG00000014585
Ailuropoda melanoleuca
ENSAMEG00000014585
I
0.424
ARID3C
Bos taurus
ENSBTAG00000025792
I
0.424
ARID3C
Canis familiaris
ENSCAFG00000024873
I
0.424
ARID3C
Felis catus
ENSFCAG00000003156
I
0.424
ARID3C
Homo sapiens
ENSG00000205143
I
0.424
Arid3c
Mus musculus
ENSMUSG00000066224
I
0.424
ENSNLEG00000004860
Nomascus leucogenys
ENSNLEG00000004860
I
0.424
ENSOARG00000009192
Ovis aries
ENSOARG00000009192
I
0.424
ENSMPUG00000004275
Mustela putorius furo
ENSMPUG00000004275
I
0.424
ARID3C
Macaca mulatta
ENSMMUG00000020786
I
0.424
ARID3C
Gorilla gorilla
ENSGGOG00000002920
I
0.424
ARID3C
Loxodonta africana
ENSLAFG00000017911
I
0.424
ENSMICG00000002379
Microcebus murinus
ENSMICG00000002379
I
0.424
ARID3C
Oryctolagus cuniculus
ENSOCUG00000000361
I
0.424