Pavir.Ia01988 (Panicum virgatum)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01388 (ARID) IPR001606 Pavir.Ia01988 T016168_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ia01988.1.p ARID/BRIGHT 87 173

Links

Other ARID/BRIGHT family TFs
Other Panicum virgatum TFs

8 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Ib03139 Panicum virgatum Pavir.Ib03139 N 0.741
Si038535m.g Setaria italica Si038535m.g N 0.600
Sb01g020470 Sorghum bicolor Sb01g020470 N 0.599
GRMZM2G365731 Zea mays GRMZM2G365731 N 0.585
Bra039294 Brassica rapa Bra039294 N 0.467
BRADI3G27760 Brachypodium distachyon BRADI3G27760 N 0.459
LPERR10G08380 Leersia perrieri LPERR10G08380 N 0.437
OB10G19040 Oryza brachyantha OB10G19040 N 0.437