CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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30190.m011245
(
Ricinus communis
)
ARID/BRIGHT,Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
PF00249 (Myb_DNA-binding)
IPR001606
IPR014778
30190.m011245
T016796_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
30190.m011245
ARID/BRIGHT
54
137
CLFDQVLSVFANEAAARGSFRPIPALLGGGKSLDLFKLFRVVRKRGGFDLVNGFWSFVVKELGLDLAASASVKLVYFKYLYELE
30190.m011245
Myb
550
599
LRWTAEEEKRFKDVVRFNLPSLDKFFWDNSRKYFRRKTKEELVSYYFNVF
Links
Other
ARID/BRIGHT,Myb/SANT
family TFs
Other
Ricinus communis
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SapurV1A.0098s0150
Salix purpurea
SapurV1A.0098s0150
N
0.752
POPTR_0003s12990
Populus trichocarpa
POPTR_0003s12990
N
0.744
POPTR_0001s09620
Populus trichocarpa
POPTR_0001s09620
N
0.744
SapurV1A.0790s0110
Salix purpurea
SapurV1A.0790s0110
N
0.742