CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra038010
(
Brassica rapa
)
ARID/BRIGHT,Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01388 (ARID)
PF00505 (HMG_box)
IPR001606
IPR000910
Bra038010
T017021_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra038010.1-P
ARID/BRIGHT
44
128
PYLFLDKLRDFLEKIGKTLEFPTVCGESLDLHQLFVEVTKRGGLQMVIKKRKAKEVTEAFNLKKPLTNAAYVIRKNYLRMLFEFE
Bra038010.1-P
Sox
221
288
PKFRRSGYNFFFAEEHKRLKAAYAGQERSLLKEIGNNWRNLSPSDREIYQGKGAEDMERYKMDMAAYK
Links
Other
ARID/BRIGHT,Sox
family TFs
Other
Brassica rapa
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo6g034770
Brassica oleracea
Bo6g034770
N
0.941