CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
MTR_5g095070
(
Medicago truncatula
)
ARID/BRIGHT,Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01388 (ARID)
PF00505 (HMG_box)
IPR001606
IPR000910
MTR_5g095070
T017045_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AET00712
ARID/BRIGHT
14
114
TQLTDVVVSGGKQYSSPNDLETFYIKLTRLLDFVGKRFNVRETSLDLYLFYLEVTRRGGYHQVGQEKKWSEVVSALKLEGNNATLCAQVENLYGYLLYEFE
AET00712
Sox
184
247
APRNQSGYQIFLKKECARLKADHRDIGVRKQMAIDAWKKMSDIDKKPYVEESKKIKEKNKEAMI
Links
Other
ARID/BRIGHT,Sox
family TFs
Other
Medicago truncatula
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ca_03621
Cicer arietinum
Ca_03621
N
0.719