CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

M437DRAFT_81785 *(Aureobasidium melanogenum)* AT hook
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF02178 (AT_hook)	IPR017956	M437DRAFT_81785	T017574_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
HMGA M01671_2.00	Arabidopsis thaliana	NNNNDWAWH	DWTWHNNNN	PBM Weirauch et al.(2014) pTH7395	0.991	0.604
HMG-I Y M02652_2.00	Pisum sativum	NDWVAAANRVMRWMAY	RTKWYKBYNTTTBWHN	SELEX Mathelier et al.(2014) MA0045.1	0.991	0.542
ANIA_01690 M01675_2.00	Aspergillus nidulans	NNNNRHDDN	NHHDYNNNN	PBM Weirauch et al.(2014) pTH8216	0.991	0.458
Hmga2 M00751_2.00	Mus musculus	NNNNRHWWNN	NNWWDYNNNN	PBM Weirauch et al.(2013) pTH3046	0.991	0.438
FGRRES_05233 M01104_2.00	Fusarium graminearum	NNNDWWAWWH	DWWTWWHNNN	PBM Lambert et al.(2019) pTH11377	0.991	0.438
HMGA2 M09771_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HMGA2_01	0.991	0.438
NCU01145 M01693_2.00	Neurospora crassa	RWATAWWTNN	NNAWWTATWY	PBM Weirauch et al.(2014) pTH8916	0.991	0.435
ENSPPYG00000004736 M01685_2.00	Pongo abelii	NNNNDWWW	WWWHNNNN	PBM Weirauch et al.(2014) pTH9279	0.991	0.417
HMGA1 M09769_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HMGIY_01	0.991	0.396
HMGA1 M09770_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HMGIY_Q4	0.991	0.396
NCU05635 M01694_2.00	Neurospora crassa	NNNWWWWNNN	NNNWWWWNNN	PBM Weirauch et al.(2014) pTH8863	0.991	0.375
FGRRES_17512 M01105_2.00	Fusarium graminearum	NNNDNWWWW	WWWWNHNNN	PBM Lambert et al.(2019) pTH11412	0.991	0.333
athp-3 M01691_2.00	Caenorhabditis elegans	NNDDWDH	DHWHHNN	PBM Weirauch et al.(2014) pTH9097	0.991	0.323
VIT_08s0007g04020 M01689_2.00	Vitis vinifera	DBNDDDDDDN	NHHHHHHNVH	PBM Weirauch et al.(2014) pTH9295	0.991	0.312
TVAG_474020 M01106_2.00	Trichomonas vaginalis	DNWWWAWW	WWTWWWNH	PBM Lambert et al.(2019) pTH11493	0.991	0.312
AHL13 M01672_2.00	Arabidopsis thaliana	NAWWTAWWWN	NWWWTAWWTN	PBM Weirauch et al.(2014) pTH8202	0.991	0.292
BRADI3G55950 M01673_2.00	Brachypodium distachyon	NNNNRHDDN	NHHDYNNNN	PBM Weirauch et al.(2014) pTH9369	0.991	0.292
OS02G0824300 M01688_2.00	Oryza sativa	NNDWAWWN	NWWTWHNN	PBM Weirauch et al.(2014) pTH8406	0.991	0.292
Q7DLU9_PEA M09772_2.00	Pisum sativum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$HMGIY_01	0.991	0.292
SUM1 M00008_2.00	Saccharomyces cerevisiae	NNDWWWH	DWWWHNN	PBM Badis et al.(2008) SUM1_2124	0.991	0.271
SUM1 M07439_2.00	Saccharomyces cerevisiae	DWAAATWWN	NWWATTTWH	PBM, CSA and or DIP-chip Mathelier et al.(2014) MA0398.1	0.991	0.271
SUM1 M08478_2.00	Saccharomyces cerevisiae	RYGWCASWAAW	WTTWSTGWCRY	Misc DeBoer et al.(2011) YDR310C_383	0.991	0.271
SUM1 M08479_2.00	Saccharomyces cerevisiae	DWAAATWWN	NWWATTTWH	Misc DeBoer et al.(2011) YDR310C_478	0.991	0.271
hmg-12 M01690_2.00	Caenorhabditis elegans	NNAWWTAWWTNN	NNAWWTAWWTNN	PBM Weirauch et al.(2014) pTH8997	0.991	0.259
kmt2cb M01679_2.00	Danio rerio	WWAWAWAT	ATWTWTWW	PBM Weirauch et al.(2014) pTH7876	0.991	0.167
PHF21A M01103_2.00	Monodelphis domestica	NNNAWATWAATN	NATTWATWTNNN	PBM Lambert et al.(2019) pTH9309	0.991	0.167
PHF21A M01682_2.00	Monodelphis domestica	NNNNNHRH	DYDNNNNN	PBM Weirauch et al.(2014) pTH9335	0.991	0.167
Phf21a M01684_2.00	Mus musculus	NNNATATWAATN	NATTWATATNNN	PBM Weirauch et al.(2014) pTH8550	0.991	0.167
PK00377.1 M01107_2.00	Cannabis sativa	DAWWWAWW	WWTWWWTH	PBM Lambert et al.(2019) pTH11338	0.991	0.167
PK26376.1 M01108_2.00	Cannabis sativa	DDWWWAWW	WWTWWWHH	PBM Lambert et al.(2019) pTH11261	0.991	0.167
BRADI5G22430 M01674_2.00	Brachypodium distachyon	VNRDDDHDD	HHDHHHYNB	PBM Weirauch et al.(2014) pTH9242	0.991	0.146
ATEG_07399 M01676_2.00	Aspergillus terreus	DHNNHNDWWW	WWWHNDNNDH	PBM Weirauch et al.(2014) pTH9237	0.991	0.146
ENSACAG00000014978 M01677_2.00	Anolis carolinensis	NNNNNDRH	DYHNNNNN	PBM Weirauch et al.(2014) pTH9222	0.991	0.146
phf21ab M01678_2.00	Danio rerio	NNNDNADW	WHTNHNNN	PBM Weirauch et al.(2014) pTH9254	0.991	0.146
phf21ab M01680_2.00	Gasterosteus aculeatus	AAAAWAAA	TTTWTTTT	PBM Weirauch et al.(2014) pTH9180	0.991	0.146
PHF21A M01681_2.00	Meleagris gallopavo	HDNHNNDNHD	HDNHNNDNHD	PBM Weirauch et al.(2014) pTH7875	0.991	0.146
Setbp1 M01683_2.00	Mus musculus	NDNNNNNNHN	NDNNNNNNHN	PBM Weirauch et al.(2014) pTH1294	0.991	0.146
Ahctf1 M00750_2.00	Mus musculus	AAAWAWAW	ATWTWTTT	PBM Weirauch et al.(2013) pTH2361	0.991	0.146
Xrp1 M01686_2.00	Drosophila melanogaster	NNNNDWAWW	WWTWHNNNN	PBM Weirauch et al.(2014) pTH9260	0.991	0.146
MTR_4g101990 M01687_2.00	Medicago truncatula	AAAWTAAT	ATTAWTTT	PBM Weirauch et al.(2014) pTH9209	0.991	0.146
estExt_fgeneshNG_pg.C_820014 M01692_2.00	Naegleria gruberi	NNNNNDRH	DYHNNNNN	PBM Weirauch et al.(2014) pTH9380	0.991	0.146
Xrp1 M05900_2.00	Drosophila melanogaster	RTKRYGYAAT	ATTRCRYMAY	B1H Zhu et al.(2011) Xrp1_CG6272_SANGER_5_FBgn0261113	0.991	0.146
SUM1 M01517_2.00	Saccharomyces cerevisiae	NNNDWAWW	WWTWHNNN	PBM Zhu et al.(2009) Sum1	0.991	0.021
For this family, TFs with SR scores > 0.990* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
KEQ65942	AT hook	98	107	KRTRGRPKSI
KEQ65942	AT hook	140	151	TRARGRPRKSDA
KEQ65942	AT hook	158	170	GRPRGRPRKEPAA
KEQ65942	AT hook	184	196	KRGRGRPKKSDST

Links
Other AT hook family TFs
Other *Aureobasidium melanogenum* TFs

1072 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
MDOA013115	Musca domestica	MDOA013115	N	0.000
ACUA021284	Anopheles culicifacies	ACUA021284	N	0.000
ACUA009064	Anopheles culicifacies	ACUA009064	N	0.000
ACOM037786	Anopheles coluzzii	ACOM037786	N	0.000
AARA010518	Anopheles arabiensis	AARA010518	N	0.000
AALB003318	Anopheles albimanus	AALB003318	N	0.000
LDEC006285	Leptinotarsa decemlineata	LDEC006285	N	0.000
HHAL007230-PA	Halyomorpha halys	HHAL007230-PA	N	0.000
Hsal_04301--XP_391906.3_APIME	Harpegnathos saltator	Hsal_04301--XP_391906.3_APIME	N	0.000
ADIR001048	Anopheles dirus	ADIR001048	N	0.000
AEPI002999	Anopheles epiroticus	AEPI002999	N	0.000
AFAF003258	Anopheles farauti	AFAF003258	N	0.000
ASTEI10578	Anopheles stephensi	ASTEI10578	N	0.000
ASIS002506	Anopheles sinensis	ASIS002506	N	0.000
AQUA008196	Anopheles quadriannulatus	AQUA008196	N	0.000
AMIN005282	Anopheles minimus	AMIN005282	N	0.000
AMEM000708	Anopheles merus	AMEM000708	N	0.000
AMEC007532	Anopheles melas	AMEC007532	N	0.000
AMAM002295	Anopheles maculatus	AMAM002295	N	0.000
AFUN002858	Anopheles funestus	AFUN002858	N	0.000
Cflo_11381--XP_391906.3_APIME	Camponotus floridanus	Cflo_11381--XP_391906.3_APIME	N	0.000
TC014708	Tribolium castaneum	TC014708	N	0.000
SINV15756	Solenopsis invicta	SINV15756	N	0.000
GF21808	Drosophila ananassae	FBgn0098808	N	0.000
GA10815	Drosophila pseudoobscura	FBgn0070871	N	0.000
NFAT	Drosophila melanogaster	FBgn0030505	N	0.000
CPIJ019088	Culex quinquefasciatus	CPIJ019088	N	0.000
AGAP013287	Anopheles gambiae	AGAP013287	N	0.000
ADAC003441	Anopheles darlingi	ADAC003441	N	0.000
ACEP10864	Atta cephalotes	ACEP10864	N	0.000
AAEL011359	Aedes aegypti	AAEL011359	N	0.000
GH12805	Drosophila grimshawi	FBgn0120284	N	0.000
GI15077	Drosophila mojavensis	FBgn0137827	N	0.000
GL22604	Drosophila persimilis	FBgn0160195	N	0.000
PHUM363570	Pediculus humanus	PHUM363570	N	0.000
NV18092	Nasonia vitripennis	NV18092	N	0.000
L798_07911	Zootermopsis nevadensis	L798_07911	N	0.000
GB45138	Apis mellifera	GB45138	N	0.000
GE17094	Drosophila yakuba	FBgn0234577	N	0.000
GK24938	Drosophila willistoni	FBgn0226897	N	0.000
GJ18884	Drosophila virilis	FBgn0206030	N	0.000
GM17623	Drosophila sechellia	FBgn0172531	N	0.000
CpipJ_CPIJ019088	Culex pipiens	CpipJ_CPIJ019088	N	0.000

M437DRAFT_81785 (Aureobasidium melanogenum) AT hook

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

1072 Related TFs

M437DRAFT_81785 **(Aureobasidium melanogenum)
AT hook**