CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000709648
(
Malus domestica
)
AT hook,MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02178 (AT_hook)
PF01429 (MBD)
IPR017956
IPR001739
MDP0000709648
T018308_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000709648
AT hook
168
180
KRKRGRPRKDHNA
MDP0000709648
AT hook
213
224
SRKRGRPRKDEN
MDP0000709648
MBD
313
367
GELGDVLPMHWKILLSLKRNGGLVRLFCKRYISPNGQQFVSCKEVNSYLISYFGV
MDP0000709648
AT hook
1187
1197
RRGRGRPRKTL
Links
Other
AT hook,MBD
family TFs
Other
Malus domestica
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pm004568
Prunus mume
Pm004568
N
0.725