CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ARF12
(
Arabidopsis thaliana
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
AT1G34310
T018389_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT1G34310.1
B3
126
228
FTKVLTASDTSAHGGFFVPKKHAIECLPSLDMSQPLPAQELLAIDLHGNQWRFNHNYRGTPQRHLLTTGWNAFTTSKKLVAGDVIVFVRGETGELRVGIRRAR
Links
Other
B3
family TFs
Other
Arabidopsis thaliana
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ARF22
Arabidopsis thaliana
AT1G34390
N
0.938
ARF20
Arabidopsis thaliana
AT1G35240
N
0.929
ARF21
Arabidopsis thaliana
AT1G34410
N
0.908
ARF15
Arabidopsis thaliana
AT1G35520
N
0.908
fgenesh1_pg.C_scaffold_1003068
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_1003068
N
0.898
fgenesh2_kg.1__3608__AT1G35540.1
Arabidopsis lyrata
fgenesh2_kg.1__3608__AT1G35540.1
N
0.898
ARF14
Arabidopsis thaliana
AT1G35540
N
0.898
fgenesh1_pm.C_scaffold_3002720
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_3002720
N
0.888
ARF23
Arabidopsis thaliana
AT1G43950
N
0.786
Bostr.1040s0030
Boechera stricta
Bostr.1040s0030
I
0.735
Bostr.15774s0314
Boechera stricta
Bostr.15774s0314
N
0.704
SapurV1A.1529s0070
Salix purpurea
SapurV1A.1529s0070
I
0.704
30068.m002516
Ricinus communis
30068.m002516
I
0.704
SapurV1A.0035s0230
Salix purpurea
SapurV1A.0035s0230
I
0.704
MTR_4g021580
Medicago truncatula
MTR_4g021580
I
0.704
GLYMA01G25270
Glycine max
GLYMA01G25270
I
0.704
GLYMA03G17450
Glycine max
GLYMA03G17450
I
0.704
Bra013748
Brassica rapa
Bra013748
I
0.704
POPTR_0001s10900
Populus trichocarpa
POPTR_0001s10900
I
0.704
POPTR_0003s14200
Populus trichocarpa
POPTR_0003s14200
I
0.704