CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AT5G42700
(
Arabidopsis thaliana
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
AT5G42700
T018478_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT5G42700.1
B3
130
221
FVKSMLQSHVSGGFWLGLPVQFCKSHLGLHDGVITLIDEEGEEYETIYLARKNGLSGGWMGFAVAHNLAYGDTLVFELVRRTAFKVYITRVG
AT5G42700.2
B3
85
176
FVKSMLQSHVSGGFWLGLPVQFCKSHLGLHDGVITLIDEEGEEYETIYLARKNGLSGGWMGFAVAHNLAYGDTLVFELVRRTAFKVYITRVG
Links
Other
B3
family TFs
Other
Arabidopsis thaliana
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh1_pm.C_scaffold_8000473
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_8000473
N
0.946
Cagra.2329s0005
Capsella grandiflora
Cagra.2329s0005
N
0.870
Carubv10027266m.g
Capsella rubella
Carubv10027266m.g
N
0.870
Bostr.3148s0222
Boechera stricta
Bostr.3148s0222
N
0.848
Bra035324
Brassica rapa
Bra035324
N
0.772
Bo2g116250
Brassica oleracea
Bo2g116250
N
0.761
Lus10006483.g
Linum usitatissimum
Lus10006483.g
N
0.728
SapurV1A.0361s0280
Salix purpurea
SapurV1A.0361s0280
N
0.717
GLYMA06G04200
Glycine max
GLYMA06G04200
N
0.717
TCM_033870
Theobroma cacao
TCM_033870
N
0.717
GLYMA04G04030
Glycine max
GLYMA04G04030
N
0.707