CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pm.C_scaffold_8001406
(
Arabidopsis lyrata
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
fgenesh1_pm.C_scaffold_8001406
T019197_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pm.C_scaffold_8001406
B3
13
105
FLKIFNSHEHAQRLVIPRGYNKYYPNPLPQTAVLKKPEGSFWNVKWTISQEETIRFQEGWEKFVKDNGLIDRDFLLFTYDGCRSFWVRIHRNG
fgenesh1_pm.C_scaffold_8001406
B3
206
295
FFISTSSCSRRVLVIARQVIKDYDLNFDGTIKLIDGFGELTRKVGKWKDRVVVYKWDEMFTRNKANQGDAIICEVIREEDVVRSIKVHFV
Links
Other
B3
family TFs
Other
Arabidopsis lyrata
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bostr.26833s0482
Boechera stricta
Bostr.26833s0482
N
0.819
AT5G57720
Arabidopsis thaliana
AT5G57720
N
0.791
Cagra.2848s0054
Capsella grandiflora
Cagra.2848s0054
N
0.742