CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_kg.6__1808__AT5G18090.1
(
Arabidopsis lyrata
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
fgenesh2_kg.6__1808__AT5G18090.1
T019219_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_kg.6__1808__AT5G18090.1
B3
18
113
FFKILRPADLSSEIMRGIPLNFIKSISDEEFSHKMVLKVSWGSSWPIKICRNPSFYFMEKKGWDQFLSDNGLGNNEFLTFTHQGNMCFSVDIYQID
fgenesh2_kg.6__1808__AT5G18090.1
B3
198
288
EFTLTIKKSYLFFLGVPKMFEELHMPREATMFKIHDPEGKRSWDVMYKLAGTQSRFCAGWIRLAKELGLVIGDVCTFTLIKPTEMLVKVSK
Links
Other
B3
family TFs
Other
Arabidopsis lyrata
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Carubv10003677m.g
Capsella rubella
Carubv10003677m.g
N
0.766
Bostr.27895s0113
Boechera stricta
Bostr.27895s0113
N
0.761
Cagra.0906s0005
Capsella grandiflora
Cagra.0906s0005
N
0.758