OBART06G06150 (Oryza barthii)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 OBART06G06150 T020006_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ARF8
M01697_2.00
Arabidopsis thaliana
NHTGTCGGN

NCCGACADN
PBM
Weirauch et al.(2014)
pTH8661
0.857 0.857
ARF5
M06701_2.00
Arabidopsis thaliana
WYTTGTCGGN

NCCGACAARW
Dap-seq
OMalley et al.(2016)
MP_col
0.765 0.765
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART06G06150.1 B3 127 229

Links

Other B3 family TFs
Other Oryza barthii TFs

544 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aquca_014_00743 Aquilegia coerulea Aquca_014_00743 I 0.000
Al_scaffold_0003_3814 Arabidopsis lyrata Al_scaffold_0003_3814 I 0.000
AT-HSFB3 Arabidopsis lyrata fgenesh1_pm.C_scaffold_4001910 I 0.000
AT-HSFA4A Arabidopsis lyrata fgenesh2_kg.7__2405__AT4G18880.1 I 0.000
scaffold_600621.1 Arabidopsis lyrata scaffold_600621.1 I 0.000
scaffold_601314.1 Arabidopsis lyrata scaffold_601314.1 I 0.000
scaffold_702441.1 Arabidopsis lyrata scaffold_702441.1 I 0.000
scaffold_702446.1 Arabidopsis lyrata scaffold_702446.1 N 0.000
scaffold_702873.1 Arabidopsis lyrata scaffold_702873.1 I 0.000
AT4G19630 Arabidopsis thaliana AT4G19630 N 0.000
AT1G77570 Arabidopsis thaliana AT1G77570 I 0.000
HSFB3 Arabidopsis thaliana AT2G41690 D 0.000
HSFA4A Arabidopsis thaliana AT4G18880 D 0.000
Bostr.26959s0010 Boechera stricta Bostr.26959s0010 I 0.000
Bostr.11568s0011 Boechera stricta Bostr.11568s0011 I 0.000
Bostr.30275s0365 Boechera stricta Bostr.30275s0365 I 0.000
Bostr.27895s0020 Boechera stricta Bostr.27895s0020 N 0.000
Bostr.30275s0431 Boechera stricta Bostr.30275s0431 I 0.000
Bostr.3359s0057 Boechera stricta Bostr.3359s0057 I 0.000
Bostr.20129s0193 Boechera stricta Bostr.20129s0193 I 0.000
BRADI1G01130 Brachypodium distachyon BRADI1G01130 I 0.000
Bo4g139270 Brassica oleracea Bo4g139270 N 0.000
Bo1g020010 Brassica oleracea Bo1g020010 I 0.000
Bo1g005040 Brassica oleracea Bo1g005040 I 0.000
Bo1g021700 Brassica oleracea Bo1g021700 I 0.000
Bo3g157380 Brassica oleracea Bo3g157380 I 0.000
Bo1g007320 Brassica oleracea Bo1g007320 I 0.000
Bo7g106320 Brassica oleracea Bo7g106320 I 0.000
Bo4g139630 Brassica oleracea Bo4g139630 I 0.000
Bo4g139200 Brassica oleracea Bo4g139200 I 0.000
Bra000235 Brassica rapa Bra000235 I 0.000
Bra025606 Brassica rapa Bra025606 I 0.000
Bra013358 Brassica rapa Bra013358 I 0.000
Bra012571 Brassica rapa Bra012571 I 0.000
Bra002882 Brassica rapa Bra002882 I 0.000
Bra025608 Brassica rapa Bra025608 I 0.000
Bra025611 Brassica rapa Bra025611 N 0.000
Bra025635 Brassica rapa Bra025635 I 0.000
Bra030021 Brassica rapa Bra030021 I 0.000
Bra022949 Brassica rapa Bra022949 I 0.000
Bra020988 Brassica rapa Bra020988 I 0.000
Bra013406 Brassica rapa Bra013406 I 0.000
PK02428.1 Cannabis sativa PK02428.1 I 0.000
PK03562.1 Cannabis sativa PK03562.1 I 0.000
PK09831.1 Cannabis sativa PK09831.1 I 0.000
Cagra.4306s0004 Capsella grandiflora Cagra.4306s0004 I 0.000
Cagra.3356s0067 Capsella grandiflora Cagra.3356s0067 I 0.000
Cagra.3262s0011 Capsella grandiflora Cagra.3262s0011 I 0.000
Cagra.0096s0075 Capsella grandiflora Cagra.0096s0075 I 0.000
Cagra.13025s0006 Capsella grandiflora Cagra.13025s0006 I 0.000
Cagra.2516s0029 Capsella grandiflora Cagra.2516s0029 N 0.000
Cagra.3262s0012 Capsella grandiflora Cagra.3262s0012 I 0.000
Cagra.3262s0013 Capsella grandiflora Cagra.3262s0013 I 0.000
Cagra.3262s0014 Capsella grandiflora Cagra.3262s0014 I 0.000
Carubv10007409m.g Capsella rubella Carubv10007409m.g I 0.000
Carubv10014950m.g Capsella rubella Carubv10014950m.g N 0.000
Carubv10006026m.g Capsella rubella Carubv10006026m.g I 0.000
Carubv10004953m.g Capsella rubella Carubv10004953m.g I 0.000
Carubv10004840m.g Capsella rubella Carubv10004840m.g I 0.000
Carubv10021131m.g Capsella rubella Carubv10021131m.g I 0.000
Carubv10024599m.g Capsella rubella Carubv10024599m.g I 0.000
evm.TU.supercontig_2.169 Carica papaya evm.TU.supercontig_2.169 I 0.000
evm.TU.supercontig_124.4 Carica papaya evm.TU.supercontig_124.4 I 0.000
Ca_08627 Cicer arietinum Ca_08627 I 0.000
Ca_09277 Cicer arietinum Ca_09277 I 0.000
Ciclev10015472m.g Citrus clementina Ciclev10015472m.g I 0.000
Ciclev10015541m.g Citrus clementina Ciclev10015541m.g I 0.000
orange1.1g016378m.g Citrus sinensis orange1.1g016378m.g I 0.000
orange1.1g015635m.g Citrus sinensis orange1.1g015635m.g I 0.000
Cucsa.378560 Cucumis sativus Cucsa.378560 I 0.000
Cucsa.164290 Cucumis sativus Cucsa.164290 I 0.000
Eucgr.I00929 Eucalyptus grandis Eucgr.I00929 I 0.000
Eucgr.E02813 Eucalyptus grandis Eucgr.E02813 I 0.000
Eucgr.C03465 Eucalyptus grandis Eucgr.C03465 I 0.000
Eucgr.C03440 Eucalyptus grandis Eucgr.C03440 I 0.000
Thhalv10017795m.g Eutrema salsugineum Thhalv10017795m.g I 0.000
Thhalv10028026m.g Eutrema salsugineum Thhalv10028026m.g I 0.000
Thhalv10028027m.g Eutrema salsugineum Thhalv10028027m.g I 0.000
Thhalv10026540m.g Eutrema salsugineum Thhalv10026540m.g I 0.000
Thhalv10025409m.g Eutrema salsugineum Thhalv10025409m.g I 0.000
Thhalv10027510m.g Eutrema salsugineum Thhalv10027510m.g I 0.000
Thhalv10012073m.g Eutrema salsugineum Thhalv10012073m.g I 0.000
Thhalv10003411m.g Eutrema salsugineum Thhalv10003411m.g I 0.000
gene23802-v1.0-hybrid Fragaria vesca gene23802-v1.0-hybrid I 0.000
GLYMA11G06010 Glycine max GLYMA11G06010 I 0.000
GLYMA13G29760 Glycine max GLYMA13G29760 I 0.000
GLYMA08G12630 Glycine max GLYMA08G12630 I 0.000
GLYMA01G39260 Glycine max GLYMA01G39260 I 0.000
GLYMA05G29470 Glycine max GLYMA05G29470 I 0.000
GLYMA11G01190 Glycine max GLYMA11G01190 I 0.000
Gorai.010G240800 Gossypium raimondii Gorai.010G240800 I 0.000
Gorai.007G053900 Gossypium raimondii Gorai.007G053900 I 0.000
Gorai.N013300 Gossypium raimondii Gorai.N013300 I 0.000
Gorai.011G036400 Gossypium raimondii Gorai.011G036400 I 0.000
MLOC_51191 Hordeum vulgare MLOC_51191 I 0.000
LPERR03G35390 Leersia perrieri LPERR03G35390 I 0.000
Lus10007318.g Linum usitatissimum Lus10007318.g I 0.000
Lus10015237.g Linum usitatissimum Lus10015237.g I 0.000
Lus10005420.g Linum usitatissimum Lus10005420.g I 0.000
Lus10029269.g Linum usitatissimum Lus10029269.g I 0.000
chr6.CM0118.920.nd Lotus japonicus chr6.CM0118.920.nd I 0.000
MDP0000126826 Malus domestica MDP0000126826 I 0.000
cassava24811.valid.m1 Manihot esculenta cassava24811.valid.m1 I 0.000
cassava14764.m1 Manihot esculenta cassava14764.m1 I 0.000
MTR_8g087540 Medicago truncatula MTR_8g087540 I 0.000
mgf006143m Mimulus guttatus mgf006143m I 0.000
GSMUA_Achr4G04500_001 Musa acuminata GSMUA_Achr4G04500_001 I 0.000
GSMUA_Achr3G06020_001 Musa acuminata GSMUA_Achr3G06020_001 I 0.000
GSMUA_Achr3G27600_001 Musa acuminata GSMUA_Achr3G27600_001 I 0.000
OBART03G41440 Oryza barthii OBART03G41440 I 0.000
OBART03G33860 Oryza barthii OBART03G33860 I 0.000
OB03G40890 Oryza brachyantha OB03G40890 I 0.000
ORGLA03G0383200 Oryza glaberrima ORGLA03G0383200 I 0.000
ORGLA03G0308600 Oryza glaberrima ORGLA03G0308600 I 0.000
OGLUM03G41290 Oryza glumaepatula OGLUM03G41290 I 0.000
OGLUM03G33530 Oryza glumaepatula OGLUM03G33530 I 0.000
BGIOSGA009826 Oryza indica BGIOSGA009826 I 0.000
OLONG_013342 Oryza longistaminata OLONG_013342 I 0.000
OMERI03G38170 Oryza meridionalis OMERI03G38170 I 0.000
OMERI03G31070 Oryza meridionalis OMERI03G31070 I 0.000
ONIVA03G35150 Oryza nivara ONIVA03G35150 I 0.000
ONIVA03G43540 Oryza nivara ONIVA03G43540 I 0.000
OPUNC03G31000 Oryza punctata OPUNC03G31000 I 0.000
OPUNC03G38490 Oryza punctata OPUNC03G38490 I 0.000
ORUFI03G43230 Oryza rufipogon ORUFI03G43230 I 0.000
ORUFI03G35260 Oryza rufipogon ORUFI03G35260 I 0.000
HSFA1 Oryza sativa OS03G0854500 I 0.000
Pavir.Ib04475 Panicum virgatum Pavir.Ib04475 I 0.000
Pavir.Ia00087 Panicum virgatum Pavir.Ia00087 I 0.000
POPTR_0006s11680 Populus trichocarpa POPTR_0006s11680 I 0.000
HSF4 Populus trichocarpa POPTR_0007s11030 I 0.000
POPTR_0004s06090 Populus trichocarpa POPTR_0004s06090 I 0.000
POPTR_0011s06820 Populus trichocarpa POPTR_0011s06820 I 0.000
Pm005887 Prunus mume Pm005887 I 0.000
Pm010169 Prunus mume Pm010169 I 0.000
PRUPE_ppa006534mg Prunus persica PRUPE_ppa006534mg I 0.000
PRUPE_ppa006514mg Prunus persica PRUPE_ppa006514mg I 0.000
SapurV1A.0181s0030 Salix purpurea SapurV1A.0181s0030 I 0.000
SMU15027452 Schmidtea mediterranea SMU15027452 I 0.000
Si035526m.g Setaria italica Si035526m.g I 0.000
Solyc03g006000.2 Solanum lycopersicum Solyc03g006000.2 I 0.000
Solyc02g090820.2 Solanum lycopersicum Solyc02g090820.2 I 0.000
PGSC0003DMG401027812 Solanum tuberosum PGSC0003DMG401027812 I 0.000
PGSC0003DMG401004023 Solanum tuberosum PGSC0003DMG401004023 I 0.000
Sb01g000730 Sorghum bicolor Sb01g000730 I 0.000
TCM_011279 Theobroma cacao TCM_011279 I 0.000
TCM_029630 Theobroma cacao TCM_029630 I 0.000
Traes_5BL_E15759DAD Triticum aestivum Traes_5BL_E15759DAD I 0.000
TRIUR3_08676 Triticum urartu TRIUR3_08676 I 0.000
VIT_10s0003g01770 Vitis vinifera VIT_10s0003g01770 I 0.000
GRMZM2G384339 Zea mays GRMZM2G384339 I 0.000
GRMZM2G115456 Zea mays GRMZM2G115456 I 0.000