CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ONIVA03G08950
(
Oryza nivara
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
ONIVA03G08950
T020302_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ONIVA03G08950.1
B3
283
378
FFRIILPGSSKTKLKLPYKFARELGDRELREARLRVAGEGRRPWDVKVFDDDVSGDVYLGRGWQEFARAHDLRDGHFLIFRYDGAAAFTVTVFDET
ONIVA03G08950.1
B3
431
517
QCNLEDKQAQYLNVPMEFQEAHEYARREKVVLRMRGEAWTVRLKHSRRERGQRTAFRYGWHRFCVDNGLAVGDTCFFRVLREGDLRR
ONIVA03G08950.2
B3
283
378
FFRIILPGSSKTKLKLPYKFARELGDRELREARLRVAGEGRRPWDVKVFDDDVSGDVYLGRGWQEFARAHDLRDGHFLIFRYDGAAAFTVTVFDET
ONIVA03G08950.2
B3
417
503
QCNLEDKQAQYLNVPMEFQEAHEYARREKVVLRMRGEAWTVRLKHSRRERGQRTAFRYGWHRFCVDNGLAVGDTCFFRVLREGDLRR
ONIVA03G08950.4
B3
15
110
FFRIILPGSSKTKLKLPYKFARELGDRELREARLRVAGEGRRPWDVKVFDDDVSGDVYLGRGWQEFARAHDLRDGHFLIFRYDGAAAFTVTVFDET
ONIVA03G08950.4
B3
162
249
RQCNLEDKQAQYLNVPMEFQEAHEYARREKVVLRMRGEAWTVRLKHSRRERGQRTAFRYGWHRFCVDNGLAVGDTCFFRVLREGDLRR
Links
Other
B3
family TFs
Other
Oryza nivara
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA012100
Oryza indica
BGIOSGA012100
N
1.000
ORGLA03G0078800
Oryza glaberrima
ORGLA03G0078800
N
0.995
OGLUM03G08230
Oryza glumaepatula
OGLUM03G08230
N
0.995
OS03G0212300
Oryza sativa
OS03G0212300
N
0.995
ORUFI03G08170
Oryza rufipogon
ORUFI03G08170
N
0.995
OMERI03G07870
Oryza meridionalis
OMERI03G07870
N
0.973
OBART03G08090
Oryza barthii
OBART03G08090
N
0.958
OPUNC03G07840
Oryza punctata
OPUNC03G07840
N
0.906