POPTR_0005s16320 (Populus trichocarpa)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 POPTR_0005s16320 T020858_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ARF16
M06708_2.00
Arabidopsis thaliana
TTTACGKTTTTGGCGGRAAAA

TTTTYCCGCCAAAAMCGTAAA
Dap-seq
OMalley et al.(2016)
ARF16_col_b
0.722 0.722
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0005s16320.1 B3 126 228

Links

Other B3 family TFs
Other Populus trichocarpa TFs

190 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
NR2E1 Homo sapiens ENSG00000112333 D 0.000
Hr83 Drosophila melanogaster FBgn0037436 D 0.000
A1YGC6_PANPA Pan paniscus A1YGC6_PANPA D 0.000
Nr2e1 Mus musculus ENSMUSG00000019803 D 0.000
SPU_012586 Strongylocentrotus purpuratus SPU_012586 I 0.000
TC010460 Tribolium castaneum TC010460 I 0.000
tetur01g07700 Tetranychus urticae tetur01g07700 I 0.000
nhr-239 Caenorhabditis elegans WBGene00021848 I 0.000
Aan_R007044 Calypte anna Aan_R007044 I 0.000
Alligator_sinensis_CCG021621.1 Alligator sinensis Alligator_sinensis_CCG021621.1 I 0.000
GF16659 Drosophila ananassae FBgn0093680 I 0.000
Cmyd_10021619 Chelonia mydas Cmyd_10021619 I 0.000
ENSBTAP00000018594-D1 Bos grunniens ENSBTAP00000018594-D1 I 0.000
ENSP00000357979 Macaca fascicularis ENSP00000357979 I 0.000
Gfo_R016106 Geospiza fortis Gfo_R016106 I 0.000
SMAR006023 Strigamia maritima SMAR006023 I 0.000
NV10871 Nasonia vitripennis NV10871 I 0.000
NEMVEDRAFT_v1g114090 Nematostella vectensis NEMVEDRAFT_v1g114090 I 0.000
GG13368 Drosophila erecta FBgn0105640 I 0.000
GH18089 Drosophila grimshawi FBgn0125557 I 0.000
GI24589 Drosophila mojavensis FBgn0147311 I 0.000
GL22067 Drosophila persimilis FBgn0159659 I 0.000
GM10889 Drosophila sechellia FBgn0165835 I 0.000
GD19868 Drosophila simulans FBgn0191357 I 0.000
GJ22654 Drosophila virilis FBgn0209758 I 0.000
GK13826 Drosophila willistoni FBgn0215834 I 0.000
GE10213 Drosophila yakuba FBgn0228087 I 0.000
HelroG148423 Helobdella robusta HelroG148423 I 0.000
ISCW008659 Ixodes scapularis ISCW008659 I 0.000
L798_08383 Zootermopsis nevadensis L798_08383 I 0.000
LotgiG132791 Lottia gigantea LotgiG132791 I 0.000
Hsal_03084--XP_001121181.1_APIME Harpegnathos saltator Hsal_03084--XP_001121181.1_APIME I 0.000
Ogr18563 Ophisaurus gracilis Ogr18563 I 0.000
Pvit_18941 Pogona vitticeps Pvit_18941 I 0.000
AMEM012481 Anopheles merus AMEM012481 I 0.000
AMIN000835 Anopheles minimus AMIN000835 I 0.000
AQUA004261 Anopheles quadriannulatus AQUA004261 I 0.000
ASTEI03427 Anopheles stephensi ASTEI03427 I 0.000
LLOJ000718 Lutzomyia longipalpis LLOJ000718 I 0.000
LLOJ001302 Lutzomyia longipalpis LLOJ001302 I 0.000
MDOA009347 Musca domestica MDOA009347 I 0.000
PPAI010314 Phlebotomus papatasi PPAI010314 I 0.000
ACAC_0001082701 Angiostrongylus cantonensis ACAC_0001082701 I 0.000
ACOC_0001282001 Angiostrongylus costaricensis ACOC_0001282001 I 0.000
BXY_0039800 Bursaphelenchus xylophilus BXY_0039800 I 0.000
HPLM_0002159101 Haemonchus placei HPLM_0002159101 I 0.000
L889_g32531 Steinernema feltiae L889_g32531 I 0.000
AMEC011506 Anopheles melas AMEC011506 I 0.000
AMAM005986 Anopheles maculatus AMAM005986 I 0.000
e_gw.356.102.1 Branchiostoma floridae e_gw.356.102.1 I 0.000
gw.353.21.1 Branchiostoma floridae gw.353.21.1 I 0.000
Ocbimv22005486m.g Octopus bimaculoides Ocbimv22005486m.g I 0.000
Sakowv30002570m.g Saccoglossus kowalevskii Sakowv30002570m.g I 0.000
LCUP007875 Lucilia cuprina LCUP007875 I 0.000
SMU15015045 Schmidtea mediterranea SMU15015045 I 0.000
nr2e1 Xenopus tropicalis XB-GENE-483554 I 0.000
nr2e1.S Xenopus laevis XB-GENE-864991 I 0.000
XP_002156561.1 Hydra magnipapillata XP_002156561.1 I 0.000
AARA006703 Anopheles arabiensis AARA006703 I 0.000
AATE004130 Anopheles atroparvus AATE004130 I 0.000
AEPI004731 Anopheles epiroticus AEPI004731 I 0.000
AFUN005541 Anopheles funestus AFUN005541 I 0.000
SSLN_0001329801 Schistocephalus solidus SSLN_0001329801 I 0.000
CpipJ_CPIJ015933 Culex pipiens CpipJ_CPIJ015933 I 0.000
NR2E1 Cavia porcellus ENSCPOG00000000097 I 0.000
ENSCSAG00000015143 Chlorocebus sabaeus ENSCSAG00000015143 I 0.000
nr2e1 Danio rerio ENSDARG00000017107 I 0.000
NR2E1 Dasypus novemcinctus ENSDNOG00000015478 I 0.000
NR2E1 Equus caballus ENSECAG00000018990 I 0.000
NR2E1 Erinaceus europaeus ENSEEUG00000015193 I 0.000
ENSFALG00000011755 Ficedula albicollis ENSFALG00000011755 I 0.000
NR2E1 Felis catus ENSFCAG00000002255 I 0.000
nr2e1 Gasterosteus aculeatus ENSGACG00000008934 I 0.000
NR2E1 Gallus gallus ENSGALG00000015305 I 0.000
ENSGGOG00000010051 Gorilla gorilla ENSGGOG00000010051 I 0.000
ENSGGOG00000027453 Gorilla gorilla ENSGGOG00000027453 I 0.000
ENSGMOG00000016036 Gadus morhua ENSGMOG00000016036 I 0.000
NR2E1 Callithrix jacchus ENSCJAG00000005966 I 0.000
NR2E1 Choloepus hoffmanni ENSCHOG00000007344 I 0.000
HR83 Aedes aegypti AAEL007350 I 0.000
ACYPI48102 Acyrthosiphon pisum ACYPI48102 I 0.000
AGAP002234 Anopheles gambiae AGAP002234 I 0.000
CapteG177303 Capitella teleta CapteG177303 I 0.000
CBG09846 Caenorhabditis briggsae CBG09846 I 0.000
CBN10661 Caenorhabditis brenneri CBN10661 I 0.000
CPIJ015933 Culex quinquefasciatus CPIJ015933 I 0.000
CRE25188 Caenorhabditis remanei CRE25188 I 0.000
NR2E1 Anolis carolinensis ENSACAG00000005957 I 0.000
ENSAMEG00000008117 Ailuropoda melanoleuca ENSAMEG00000008117 I 0.000
ENSAPLG00000010675 Anas platyrhynchos ENSAPLG00000010675 I 0.000
NR2E1 Bos taurus ENSBTAG00000013991 I 0.000
NR2E1 Canis familiaris ENSCAFG00000003761 I 0.000
ENSLACG00000015675 Latimeria chalumnae ENSLACG00000015675 I 0.000
NR2E1 Loxodonta africana ENSLAFG00000013583 I 0.000
NR2E1 Pan troglodytes ENSPTRG00000018472 I 0.000
NR2E1 Pteropus vampyrus ENSPVAG00000001731 I 0.000
Nr2e1 Rattus norvegicus ENSRNOG00000050550 I 0.000
NR2E1 Sorex araneus ENSSARG00000013555 I 0.000
ENSSHAG00000017854 Sarcophilus harrisii ENSSHAG00000017854 I 0.000
NR2E1 Sus scrofa ENSSSCG00000004384 I 0.000
ENSSTOG00000007248 Ictidomys tridecemlineatus ENSSTOG00000007248 I 0.000
NR2E1 Tupaia belangeri ENSTBEG00000011676 I 0.000
NR2E1 Taeniopygia guttata ENSTGUG00000012147 I 0.000
nr2e1 Tetraodon nigroviridis ENSTNIG00000012282 I 0.000
nr2e1 Takifugu rubripes ENSTRUG00000001893 I 0.000
NR2E1 Tursiops truncatus ENSTTRG00000008863 I 0.000
ENSXMAG00000003283 Xiphophorus maculatus ENSXMAG00000003283 I 0.000
ENSPSIG00000006035 Pelodiscus sinensis ENSPSIG00000006035 I 0.000
ENSPPYG00000016893 Pongo abelii ENSPPYG00000016893 I 0.000
ENSLOCG00000016602 Lepisosteus oculatus ENSLOCG00000016602 I 0.000
NR2E1 Myotis lucifugus ENSMLUG00000005543 I 0.000
NR2E1 Macaca mulatta ENSMMUG00000023767 I 0.000
NR2E1 Monodelphis domestica ENSMODG00000018005 I 0.000
ENSMPUG00000009805 Mustela putorius furo ENSMPUG00000009805 I 0.000
ENSNLEG00000013646 Nomascus leucogenys ENSNLEG00000013646 I 0.000
ENSOARG00000010848 Ovis aries ENSOARG00000010848 I 0.000
NR2E1 Oryctolagus cuniculus ENSOCUG00000005853 I 0.000
NR2E1 Otolemur garnettii ENSOGAG00000011992 I 0.000
ENSONIG00000013281 Oreochromis niloticus ENSONIG00000013281 I 0.000
nr2e1 Oryzias latipes ENSORLG00000013426 I 0.000
ENSPANG00000016092 Papio anubis ENSPANG00000016092 I 0.000
ENSPFOG00000019532 Poecilia formosa ENSPFOG00000019532 I 0.000
GA10225 Drosophila pseudoobscura FBgn0070284 I 0.000
L596_g19535 Steinernema carpocapsae L596_g19535 N 0.000
L892_g29081 Steinernema scapterisci L892_g29081 N 0.000