TCM_037983 (Theobroma cacao)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 TCM_037983 T021544_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
REM19
M06702_2.00 		Arabidopsis thaliana
TKWTTTTTTTTTKKY
RMMAAAAAAAAAWMA		 Dap-seq
OMalley et al.(2016)
REM19_col_a 		0.775 0.775
REM19
M06703_2.00 		Arabidopsis thaliana
NWBTTTTTTTTTTTTKKHHWH
DWDDMMAAAAAAAAAAAAVWN		 Dap-seq
OMalley et al.(2016)
REM19_colamp_a 		0.775 0.775
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY30946 B3 1 80

Links

Other B3 family TFs
Other Theobroma cacao TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
DREB2A Arabidopsis thaliana AT5G05410 D 0.000
PK07402.1 Cannabis sativa PK07402.1 D 0.000
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.000
Cagra.1655s0066 Capsella grandiflora Cagra.1655s0066 I 0.000
Bostr.19424s1037 Boechera stricta Bostr.19424s1037 I 0.000
Bostr.13129s0423 Boechera stricta Bostr.13129s0423 I 0.000
cassava46663.m1 Manihot esculenta cassava46663.m1 I 0.000
29820.m001008 Ricinus communis 29820.m001008 I 0.000
29729.m002292 Ricinus communis 29729.m002292 I 0.000
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I 0.000
Cagra.7053s0020 Capsella grandiflora Cagra.7053s0020 I 0.000
Carubv10001099m.g Capsella rubella Carubv10001099m.g I 0.000
Carubv10013771m.g Capsella rubella Carubv10013771m.g I 0.000
Carubv10023556m.g Capsella rubella Carubv10023556m.g I 0.000
Eucgr.G03094 Eucalyptus grandis Eucgr.G03094 I 0.000
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.000
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.000
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.000
Thhalv10021161m.g Eutrema salsugineum Thhalv10021161m.g I 0.000
chr1.LjT01D01.90.nd Lotus japonicus chr1.LjT01D01.90.nd I 0.000
TCM_021596 Theobroma cacao TCM_021596 I 0.000
Solyc06g050520.1 Solanum lycopersicum Solyc06g050520.1 I 0.000
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I 0.000
Bra028759 Brassica rapa Bra028759 I 0.000
Bra005852 Brassica rapa Bra005852 I 0.000
Bra001386 Brassica rapa Bra001386 I 0.000
Bo9g177130 Brassica oleracea Bo9g177130 I 0.000
Bo5g136930 Brassica oleracea Bo5g136930 I 0.000
Bo3g063910 Brassica oleracea Bo3g063910 I 0.000
Bo2g006960 Brassica oleracea Bo2g006960 I 0.000
Bo1g141310 Brassica oleracea Bo1g141310 I 0.000
Bra029889 Brassica rapa Bra029889 I 0.000
Bra034159 Brassica rapa Bra034159 I 0.000
PGSC0003DMG401023951 Solanum tuberosum PGSC0003DMG401023951 I 0.000
MTR_7g070220 Medicago truncatula MTR_7g070220 I 0.000
MTR_5g083340 Medicago truncatula MTR_5g083340 I 0.000
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.000
GLYMA18G43750 Glycine max GLYMA18G43750 I 0.000
GLYMA07G19221 Glycine max GLYMA07G19221 I 0.000
DREB2A Arabidopsis lyrata fgenesh2_kg.6__469__AT5G05410.1 I 0.000
DREB2B Arabidopsis lyrata fgenesh2_kg.3__1148__AT3G11020.1 I 0.000
DREB2B Arabidopsis thaliana AT3G11020 I 0.000