30147.m014418 (Ricinus communis)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 30147.m014418 T022202_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ARF2
M06714_2.00
Arabidopsis thaliana
NHTGTCKSHD

HDSMGACADN
Dap-seq
OMalley et al.(2016)
ARF2_col_v31
0.772 0.772
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
30147.m014418 B3 158 252

Links

Other B3 family TFs
Other Ricinus communis TFs

145 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30128.m008545 Ricinus communis 30128.m008545 I 0.728
AMTR_s00016p00168950 Amborella trichopoda AMTR_s00016p00168950 I 0.701
AMTR_s00057p00141830 Amborella trichopoda AMTR_s00057p00141830 I 0.728
Aquca_008_00175 Aquilegia coerulea Aquca_008_00175 I 0.717
ARF1 Vitis vinifera VIT_12s0035g01800 I 0.707
ARF2 Arabidopsis thaliana AT5G62000 D 0.772
ARF2 Vitis vinifera VIT_17s0000g00320 I 0.772
ARF2 Arabidopsis lyrata scaffold_802850.1 I 0.772
ARF23 Oryza indica BGIOSGA033901 I 0.772
ARF4 Oryza sativa OS01G0927600 I 0.772
ARF9 Oryza sativa OS04G0442000 I 0.707
BGIOSGA005099 Oryza indica BGIOSGA005099 I 0.772
BGIOSGA016467 Oryza indica BGIOSGA016467 I 0.707
Bo2g161810 Brassica oleracea Bo2g161810 I 0.772
Bo3g108130 Brassica oleracea Bo3g108130 I 0.772
Bo9g014770 Brassica oleracea Bo9g014770 I 0.772
Bostr.26833s0038 Boechera stricta Bostr.26833s0038 I 0.772
Bra010048 Brassica rapa Bra010048 I 0.772
Bra035910 Brassica rapa Bra035910 I 0.772
BRADI2G59480 Brachypodium distachyon BRADI2G59480 I 0.761
BRADI4G07470 Brachypodium distachyon BRADI4G07470 I 0.750
BRADI4G17410 Brachypodium distachyon BRADI4G17410 I 0.714
Cagra.4553s0009 Capsella grandiflora Cagra.4553s0009 I 0.772
Carubv10025860m.g Capsella rubella Carubv10025860m.g I 0.772
cassava17839.valid.m1 Manihot esculenta cassava17839.valid.m1 I 0.772
cassava17840.valid.m1 Manihot esculenta cassava17840.valid.m1 I 0.772
cassava37256.valid.m1 Manihot esculenta cassava37256.valid.m1 I 0.772
cassava44131.valid.m1 Manihot esculenta cassava44131.valid.m1 I 0.717
cassava44132.valid.m1 Manihot esculenta cassava44132.valid.m1 I 0.717
cassava47296.m1 Manihot esculenta cassava47296.m1 I 0.717
cassava47297.m1 Manihot esculenta cassava47297.m1 I 0.717
cassava47298.m1 Manihot esculenta cassava47298.m1 I 0.717
cassava47299.m1 Manihot esculenta cassava47299.m1 I 0.717
cassava47300.m1 Manihot esculenta cassava47300.m1 I 0.717
cassava47301.m1 Manihot esculenta cassava47301.m1 I 0.717
Ca_05681 Cicer arietinum Ca_05681 I 0.772
chr4.CM0175.280.nc Lotus japonicus chr4.CM0175.280.nc I 0.772
Ciclev10030696m.g Citrus clementina Ciclev10030696m.g I 0.724
Cla019614 Citrullus lanatus Cla019614 I 0.772
Cucsa.156920 Cucumis sativus Cucsa.156920 I 0.772
Eucgr.B03551 Eucalyptus grandis Eucgr.B03551 I 0.750
evm.TU.contig_31756 Carica papaya evm.TU.contig_31756 I 0.772
F775_31280 Aegilops tauschii F775_31280 I 0.761
F775_32662 Aegilops tauschii F775_32662 I 0.761
gene06434-v1.0-hybrid Fragaria vesca gene06434-v1.0-hybrid I 0.772
GLYMA04G37760 Glycine max GLYMA04G37760 I 0.772
GLYMA05G38540 Glycine max GLYMA05G38540 I 0.772
GLYMA06G17320 Glycine max GLYMA06G17320 I 0.772
GLYMA08G01100 Glycine max GLYMA08G01100 I 0.772
GLYMA16G00220 Glycine max GLYMA16G00220 I 0.707
Gorai.001G054600 Gossypium raimondii Gorai.001G054600 I 0.772
Gorai.007G044900 Gossypium raimondii Gorai.007G044900 I 0.711
Gorai.008G210200 Gossypium raimondii Gorai.008G210200 I 0.761
GRMZM2G006042 Zea mays GRMZM2G006042 I 0.761
GRMZM2G116557 Zea mays GRMZM2G116557 I 0.772
GRMZM2G137413 Zea mays GRMZM2G137413 I 0.717
GRMZM2G338259 Zea mays GRMZM2G338259 I 0.772
GRMZM2G352159 Zea mays GRMZM2G352159 I 0.750
GRMZM2G378580 Zea mays GRMZM2G378580 I 0.750
GRMZM2G702026 Zea mays GRMZM2G702026 I 0.717
GSMUA_Achr10G12070_001 Musa acuminata GSMUA_Achr10G12070_001 I 0.783
GSMUA_Achr10G16170_001 Musa acuminata GSMUA_Achr10G16170_001 I 0.717
GSMUA_Achr6G08090_001 Musa acuminata GSMUA_Achr6G08090_001 I 0.772
GSMUA_Achr6G12780_001 Musa acuminata GSMUA_Achr6G12780_001 I 0.728
GSMUA_Achr9G08310_001 Musa acuminata GSMUA_Achr9G08310_001 I 0.707
GSMUA_AchrUn_randomG14770_001 Musa acuminata GSMUA_AchrUn_randomG14770_001 I 0.750
LjSGA_022281.1 Lotus japonicus LjSGA_022281.1 I 0.707
LjSGA_068216.1 Lotus japonicus LjSGA_068216.1 I 0.772
LPERR11G11950 Leersia perrieri LPERR11G11950 I 0.772
LPERR12G09930 Leersia perrieri LPERR12G09930 I 0.724
Lus10032541.g Linum usitatissimum Lus10032541.g I 0.772
Lus10043200.g Linum usitatissimum Lus10043200.g I 0.772
MDP0000258032 Malus domestica MDP0000258032 I 0.772
MDP0000310875 Malus domestica MDP0000310875 I 0.761
MDP0000929655 Malus domestica MDP0000929655 I 0.707
mgf006511m Mimulus guttatus mgf006511m I 0.772
mgf015308m Mimulus guttatus mgf015308m I 0.772
mgf020855m Mimulus guttatus mgf020855m I 0.761
MLOC_64596 Hordeum vulgare MLOC_64596 I 0.728
MLOC_68907 Hordeum vulgare MLOC_68907 I 0.761
MTR_2g005240 Medicago truncatula MTR_2g005240 I 0.707
MTR_8g100050 Medicago truncatula MTR_8g100050 I 0.772
OB02G28170 Oryza brachyantha OB02G28170 I 0.717
OB04G20880 Oryza brachyantha OB04G20880 I 0.707
OB11G21910 Oryza brachyantha OB11G21910 I 0.772
OB12G20020 Oryza brachyantha OB12G20020 I 0.761
OBART01G42570 Oryza barthii OBART01G42570 I 0.772
OBART11G15270 Oryza barthii OBART11G15270 I 0.772
OGLUM01G46840 Oryza glumaepatula OGLUM01G46840 I 0.772
OGLUM04G13380 Oryza glumaepatula OGLUM04G13380 I 0.707
OGLUM11G14710 Oryza glumaepatula OGLUM11G14710 I 0.772
OLONG_022378 Oryza longistaminata OLONG_022378 I 0.772
OMERI01G39560 Oryza meridionalis OMERI01G39560 I 0.772
OMERI04G12260 Oryza meridionalis OMERI04G12260 I 0.707
OMERI11G12590 Oryza meridionalis OMERI11G12590 I 0.772
ONIVA01G48620 Oryza nivara ONIVA01G48620 I 0.772
ONIVA04G11850 Oryza nivara ONIVA04G11850 I 0.707
ONIVA12G10760 Oryza nivara ONIVA12G10760 I 0.772
OPUNC01G41560 Oryza punctata OPUNC01G41560 I 0.772
OPUNC04G11520 Oryza punctata OPUNC04G11520 I 0.717
OPUNC11G12650 Oryza punctata OPUNC11G12650 I 0.772
orange1.1g004792m.g Citrus sinensis orange1.1g004792m.g I 0.724
ORGLA01G0363100 Oryza glaberrima ORGLA01G0363100 I 0.772
ORGLA04G0107000 Oryza glaberrima ORGLA04G0107000 I 0.707
ORGLA11G0129300 Oryza glaberrima ORGLA11G0129300 I 0.772
ORUFI01G45980 Oryza rufipogon ORUFI01G45980 I 0.772
ORUFI04G14900 Oryza rufipogon ORUFI04G14900 I 0.707
ORUFI11G16290 Oryza rufipogon ORUFI11G16290 I 0.772
OS11G0523800 Oryza sativa OS11G0523800 I 0.772
Pavir.Aa01676 Panicum virgatum Pavir.Aa01676 I 0.717
Pavir.Ab01961 Panicum virgatum Pavir.Ab01961 I 0.707
Pavir.Cb00753 Panicum virgatum Pavir.Cb00753 I 0.761
Pavir.Ea03860 Panicum virgatum Pavir.Ea03860 I 0.772
Pavir.Eb03734 Panicum virgatum Pavir.Eb03734 I 0.772
Pavir.J11622 Panicum virgatum Pavir.J11622 I 0.761
Pavir.J22605 Panicum virgatum Pavir.J22605 I 0.707
PDK_20s1394651g001 Phoenix dactylifera PDK_20s1394651g001 I 0.707
PDK_20s1585531g001 Phoenix dactylifera PDK_20s1585531g001 I 0.717
PDK_20s1869091g001 Phoenix dactylifera PDK_20s1869091g001 I 0.772
PGSC0003DMG400014179 Solanum tuberosum PGSC0003DMG400014179 I 0.714
PGSC0003DMG400014452 Solanum tuberosum PGSC0003DMG400014452 I 0.772
PK12669.1 Cannabis sativa PK12669.1 I 0.707
PK16974.1 Cannabis sativa PK16974.1 I 0.772
Pm024588 Prunus mume Pm024588 I 0.772
POPTR_0004s23770 Populus trichocarpa POPTR_0004s23770 I 0.707
POPTR_0012s10790 Populus trichocarpa POPTR_0012s10790 I 0.772
POPTR_0015s11660 Populus trichocarpa POPTR_0015s11660 I 0.772
PRUPE_ppa001392mg Prunus persica PRUPE_ppa001392mg I 0.772
SapurV1A.0422s0040 Salix purpurea SapurV1A.0422s0040 I 0.707
SapurV1A.0517s0240 Salix purpurea SapurV1A.0517s0240 I 0.772
SapurV1A.0672s0210 Salix purpurea SapurV1A.0672s0210 I 0.772
SapurV1A.0774s0040 Salix purpurea SapurV1A.0774s0040 I 0.750
Sb03g044630 Sorghum bicolor Sb03g044630 I 0.772
Sb08g014320 Sorghum bicolor Sb08g014320 I 0.750
Si000340m.g Setaria italica Si000340m.g I 0.772
Si016562m.g Setaria italica Si016562m.g I 0.717
Si021216m.g Setaria italica Si021216m.g I 0.761
Solyc03g118290.2 Solanum lycopersicum Solyc03g118290.2 I 0.772
Solyc12g042070.1 Solanum lycopersicum Solyc12g042070.1 I 0.772
TCM_008374 Theobroma cacao TCM_008374 I 0.739
TCM_014743 Theobroma cacao TCM_014743 I 0.714
Thhalv10003641m.g Eutrema salsugineum Thhalv10003641m.g I 0.772
TRAES3BF001100080CFD_g Triticum aestivum TRAES3BF001100080CFD_g I 0.761
TRIUR3_17755 Triticum urartu TRIUR3_17755 I 0.761
VIT_01s0244g00150 Vitis vinifera VIT_01s0244g00150 I 0.750