cassava39646.m1 (Manihot esculenta)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 cassava39646.m1 T022283_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava39646.m1 B3 335 436

Links

Other B3 family TFs
Other Manihot esculenta TFs

183 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29915.m000469 Ricinus communis 29915.m000469 N 0.889
29917.m001969 Ricinus communis 29917.m001969 N 0.960
29976.m000497 Ricinus communis 29976.m000497 N 0.808
AMTR_s00003p00266720 Amborella trichopoda AMTR_s00003p00266720 N 0.879
Aquca_008_00005 Aquilegia coerulea Aquca_008_00005 N 0.808
Aquca_045_00208 Aquilegia coerulea Aquca_045_00208 N 0.765
Aquca_063_00016 Aquilegia coerulea Aquca_063_00016 N 0.889
BGIOSGA023709 Oryza indica BGIOSGA023709 N 0.848
BGIOSGA025947 Oryza indica BGIOSGA025947 N 0.889
Bo1g024250 Brassica oleracea Bo1g024250 N 0.758
Bo3g024640 Brassica oleracea Bo3g024640 N 0.818
Bo4g058460 Brassica oleracea Bo4g058460 N 0.838
Bo4g173060 Brassica oleracea Bo4g173060 N 0.828
Bo7g115560 Brassica oleracea Bo7g115560 N 0.889
Bo7g115570 Brassica oleracea Bo7g115570 N 0.889
Bostr.10689s0100 Boechera stricta Bostr.10689s0100 N 0.788
Bostr.24513s0191 Boechera stricta Bostr.24513s0191 N 0.827
Bostr.7867s1055 Boechera stricta Bostr.7867s1055 N 0.889
Bra013535 Brassica rapa Bra013535 N 0.758
Bra018313 Brassica rapa Bra018313 N 0.838
Bra021635 Brassica rapa Bra021635 N 0.828
Bra022801 Brassica rapa Bra022801 N 0.818
Bra023968 Brassica rapa Bra023968 N 0.889
BRADI1G17680 Brachypodium distachyon BRADI1G17680 N 0.859
BRADI1G24720 Brachypodium distachyon BRADI1G24720 N 0.899
Cagra.0567s0011 Capsella grandiflora Cagra.0567s0011 N 0.818
Cagra.12385s0007 Capsella grandiflora Cagra.12385s0007 N 0.814
Cagra.3519s0007 Capsella grandiflora Cagra.3519s0007 N 0.758
Carubv10004192m.g Capsella rubella Carubv10004192m.g N 0.758
Carubv10004194m.g Capsella rubella Carubv10004194m.g N 0.814
Carubv10022654m.g Capsella rubella Carubv10022654m.g N 0.827
cassava13133.valid.m1 Manihot esculenta cassava13133.valid.m1 N 0.798
cassava25238.valid.m1 Manihot esculenta cassava25238.valid.m1 N 0.879
cassava41301.m1 Manihot esculenta cassava41301.m1 N 1.000
Ca_00244 Cicer arietinum Ca_00244 N 0.771
Ca_08924 Cicer arietinum Ca_08924 N 0.838
Ca_15659 Cicer arietinum Ca_15659 N 0.735
Ca_23185 Cicer arietinum Ca_23185 N 0.869
Ciclev10000225m.g Citrus clementina Ciclev10000225m.g N 0.838
Ciclev10011039m.g Citrus clementina Ciclev10011039m.g N 0.889
Ciclev10014219m.g Citrus clementina Ciclev10014219m.g N 0.970
Cla008225 Citrullus lanatus Cla008225 N 0.808
Cla018330 Citrullus lanatus Cla018330 N 0.869
Cucsa.045980 Cucumis sativus Cucsa.045980 N 0.929
Cucsa.111990 Cucumis sativus Cucsa.111990 N 0.750
Cucsa.177010 Cucumis sativus Cucsa.177010 N 0.869
Eucgr.B04027 Eucalyptus grandis Eucgr.B04027 N 0.758
Eucgr.E03465 Eucalyptus grandis Eucgr.E03465 N 0.917
Eucgr.E03467 Eucalyptus grandis Eucgr.E03467 N 0.789
Eucgr.F02704 Eucalyptus grandis Eucgr.F02704 N 0.869
Eucgr.L01473 Eucalyptus grandis Eucgr.L01473 N 0.919
evm.TU.supercontig_0.91 Carica papaya evm.TU.supercontig_0.91 N 0.879
evm.TU.supercontig_2.296 Carica papaya evm.TU.supercontig_2.296 N 0.818
F775_30051 Aegilops tauschii F775_30051 N 0.771
F775_32613 Aegilops tauschii F775_32613 N 0.848
gene13877-v1.0-hybrid Fragaria vesca gene13877-v1.0-hybrid N 0.889
gene28098-v1.0-hybrid Fragaria vesca gene28098-v1.0-hybrid N 0.838
gene30690-v1.0-hybrid Fragaria vesca gene30690-v1.0-hybrid N 0.918
GLYMA01G32810 Glycine max GLYMA01G32810 N 0.869
GLYMA02G40280 Glycine max GLYMA02G40280 N 0.768
GLYMA03G04330 Glycine max GLYMA03G04330 N 0.869
GLYMA09G15521 Glycine max GLYMA09G15521 N 0.820
GLYMA11G31234 Glycine max GLYMA11G31234 N 0.828
GLYMA13G31970 Glycine max GLYMA13G31970 N 0.879
GLYMA14G38492 Glycine max GLYMA14G38492 N 0.798
GLYMA15G07350 Glycine max GLYMA15G07350 N 0.879
GLYMA18G05840 Glycine max GLYMA18G05840 N 0.828
Gorai.003G152700 Gossypium raimondii Gorai.003G152700 N 0.828
Gorai.005G004300 Gossypium raimondii Gorai.005G004300 N 0.869
Gorai.009G173100 Gossypium raimondii Gorai.009G173100 N 0.929
Gorai.011G022400 Gossypium raimondii Gorai.011G022400 N 0.949
Gorai.011G127500 Gossypium raimondii Gorai.011G127500 N 0.869
GRMZM2G008356 Zea mays GRMZM2G008356 N 0.879
GRMZM2G158162 Zea mays GRMZM2G158162 N 0.828
GRMZM2G172621 Zea mays GRMZM2G172621 N 0.828
GSMUA_Achr4G23790_001 Musa acuminata GSMUA_Achr4G23790_001 N 0.879
GSMUA_Achr5G27930_001 Musa acuminata GSMUA_Achr5G27930_001 N 0.818
GSMUA_Achr7G00120_001 Musa acuminata GSMUA_Achr7G00120_001 N 0.889
GSMUA_Achr8G01750_001 Musa acuminata GSMUA_Achr8G01750_001 N 0.818
GSMUA_Achr8G03800_001 Musa acuminata GSMUA_Achr8G03800_001 N 0.899
HSI2 Arabidopsis lyrata scaffold_401535.1 N 0.808
HSL1 Vitis vinifera VIT_08s0058g01300 N 0.899
HSL1 Arabidopsis lyrata scaffold_700997.1 N 0.814
LjSGA_009543.1 Lotus japonicus LjSGA_009543.1 N 0.758
LjSGA_029833.1 Lotus japonicus LjSGA_029833.1 N 0.800
LPERR07G16110 Leersia perrieri LPERR07G16110 N 0.889
LPERR07G23240 Leersia perrieri LPERR07G23240 N 0.848
Lus10018440.g Linum usitatissimum Lus10018440.g N 0.879
Lus10022741.g Linum usitatissimum Lus10022741.g N 0.838
Lus10025142.g Linum usitatissimum Lus10025142.g N 0.859
Lus10025226.g Linum usitatissimum Lus10025226.g N 0.879
MDP0000127640 Malus domestica MDP0000127640 N 0.818
MDP0000229344 Malus domestica MDP0000229344 N 0.818
MDP0000267885 Malus domestica MDP0000267885 N 0.818
MDP0000274788 Malus domestica MDP0000274788 N 0.747
mgf007363m Mimulus guttatus mgf007363m N 0.859
mgf007846m Mimulus guttatus mgf007846m N 0.778
mgf013365m Mimulus guttatus mgf013365m N 0.778
mgf024907m Mimulus guttatus mgf024907m N 0.837
MLOC_36861 Hordeum vulgare MLOC_36861 N 0.779
MLOC_4657 Hordeum vulgare MLOC_4657 N 0.889
MTR_2g011940 Medicago truncatula MTR_2g011940 N 0.869
MTR_3g467380 Medicago truncatula MTR_3g467380 N 0.828
MTR_4g028130 Medicago truncatula MTR_4g028130 N 0.869
OB07G31850 Oryza brachyantha OB07G31850 N 0.848
OBART07G18780 Oryza barthii OBART07G18780 N 0.889
OBART07G26400 Oryza barthii OBART07G26400 N 0.848
OGLUM07G18530 Oryza glumaepatula OGLUM07G18530 N 0.889
OGLUM07G26430 Oryza glumaepatula OGLUM07G26430 N 0.848
OLONG_008212 Oryza longistaminata OLONG_008212 N 0.848
OLONG_013183 Oryza longistaminata OLONG_013183 N 0.889
OMERI07G15550 Oryza meridionalis OMERI07G15550 N 0.889
OMERI07G23020 Oryza meridionalis OMERI07G23020 N 0.848
ONIVA07G17160 Oryza nivara ONIVA07G17160 N 0.889
ONIVA07G26110 Oryza nivara ONIVA07G26110 N 0.848
OPUNC07G17640 Oryza punctata OPUNC07G17640 N 0.889
OPUNC07G24850 Oryza punctata OPUNC07G24850 N 0.747
orange1.1g002489m.g Citrus sinensis orange1.1g002489m.g N 0.970
orange1.1g002708m.g Citrus sinensis orange1.1g002708m.g N 0.889
ORGLA07G0151800 Oryza glaberrima ORGLA07G0151800 N 0.889
ORGLA07G0207500 Oryza glaberrima ORGLA07G0207500 N 0.848
ORUFI07G19520 Oryza rufipogon ORUFI07G19520 N 0.889
ORUFI07G27410 Oryza rufipogon ORUFI07G27410 N 0.848
OS07G0563350 Oryza sativa OS07G0563350 N 0.849
OS07G0679700 Oryza sativa OS07G0679700 N 0.848
Pavir.Ba00225 Panicum virgatum Pavir.Ba00225 N 0.838
Pavir.Ba00654 Panicum virgatum Pavir.Ba00654 N 0.889
Pavir.Bb03074 Panicum virgatum Pavir.Bb03074 N 0.879
Pavir.Bb03754 Panicum virgatum Pavir.Bb03754 N 0.838
PDK_20s13009463g004 Phoenix dactylifera PDK_20s13009463g004 N 0.869
PDK_20s13009466g004 Phoenix dactylifera PDK_20s13009466g004 N 0.828
PDK_20s1314471g001 Phoenix dactylifera PDK_20s1314471g001 N 0.793
PDK_20s1397381g002 Phoenix dactylifera PDK_20s1397381g002 N 0.725
PDK_20s1455001g004 Phoenix dactylifera PDK_20s1455001g004 N 0.783
PK04158.1 Cannabis sativa PK04158.1 N 0.949
PK09020.1 Cannabis sativa PK09020.1 N 0.837
PK13763.1 Cannabis sativa PK13763.1 N 0.899
Pm000247 Prunus mume Pm000247 N 0.838
Pm003031 Prunus mume Pm003031 N 0.889
Pm009906 Prunus mume Pm009906 N 0.970
POPTR_0004s03530 Populus trichocarpa POPTR_0004s03530 N 0.949
POPTR_0006s10880 Populus trichocarpa POPTR_0006s10880 N 0.889
POPTR_0011s04340 Populus trichocarpa POPTR_0011s04340 N 0.960
POPTR_0013s15330 Populus trichocarpa POPTR_0013s15330 N 0.778
POPTR_0016s14350 Populus trichocarpa POPTR_0016s14350 N 0.889
POPTR_0019s15070 Populus trichocarpa POPTR_0019s15070 N 0.808
PRUPE_ppa001220mg Prunus persica PRUPE_ppa001220mg N 0.970
PRUPE_ppa001229mg Prunus persica PRUPE_ppa001229mg N 0.838
PRUPE_ppa001234mg Prunus persica PRUPE_ppa001234mg N 0.889
SapurV1A.0028s0060 Salix purpurea SapurV1A.0028s0060 N 0.929
SapurV1A.0044s0150 Salix purpurea SapurV1A.0044s0150 N 0.949
SapurV1A.0065s0470 Salix purpurea SapurV1A.0065s0470 N 0.889
SapurV1A.0215s0260 Salix purpurea SapurV1A.0215s0260 N 0.798
SapurV1A.0914s0080 Salix purpurea SapurV1A.0914s0080 N 0.889
SapurV1A.1353s0040 Salix purpurea SapurV1A.1353s0040 N 0.768
Sb02g036430 Sorghum bicolor Sb02g036430 N 0.889
Sb02g043000 Sorghum bicolor Sb02g043000 N 0.828
SELMODRAFT_451626 Selaginella moellendorffii SELMODRAFT_451626 N 0.818
SELMODRAFT_451631 Selaginella moellendorffii SELMODRAFT_451631 N 0.818
SELMODRAFT_451634 Selaginella moellendorffii SELMODRAFT_451634 N 0.727
SELMODRAFT_451635 Selaginella moellendorffii SELMODRAFT_451635 N 0.727
Si028829m.g Setaria italica Si028829m.g N 0.879
Si028834m.g Setaria italica Si028834m.g N 0.838
Solyc02g079020.2 Solanum lycopersicum Solyc02g079020.2 N 0.909
Solyc06g082520.2 Solanum lycopersicum Solyc06g082520.2 N 0.828
Solyc10g075030.1 Solanum lycopersicum Solyc10g075030.1 N 0.879
TCM_019701 Theobroma cacao TCM_019701 N 0.879
TCM_029976 Theobroma cacao TCM_029976 N 0.939
TCM_042290 Theobroma cacao TCM_042290 N 0.838
Thhalv10016263m.g Eutrema salsugineum Thhalv10016263m.g N 0.808
Thhalv10024481m.g Eutrema salsugineum Thhalv10024481m.g N 0.889
Thhalv10024526m.g Eutrema salsugineum Thhalv10024526m.g N 0.778
Traes_2AS_C4FD8E351 Triticum aestivum Traes_2AS_C4FD8E351 N 0.889
Traes_2AS_F4CEC9849 Triticum aestivum Traes_2AS_F4CEC9849 N 0.848
Traes_2BS_5B00A8C50 Triticum aestivum Traes_2BS_5B00A8C50 N 0.848
Traes_2BS_A61094919 Triticum aestivum Traes_2BS_A61094919 N 0.889
Traes_2DS_3E4E3BEFC Triticum aestivum Traes_2DS_3E4E3BEFC N 0.889
Traes_2DS_B1C947D2B Triticum aestivum Traes_2DS_B1C947D2B N 0.848
TRIUR3_04238 Triticum urartu TRIUR3_04238 N 0.848
VAL1 Arabidopsis thaliana AT2G30470 N 0.798
VAL2 Arabidopsis thaliana AT4G32010 N 0.814
VAL3 Vitis vinifera VIT_00s0181g00260 N 0.919
VIT_06s0004g08100 Vitis vinifera VIT_06s0004g08100 N 0.808