CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.1150s0033
(
Capsella grandiflora
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Cagra.1150s0033
T022739_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.1150s0033.1.p
B3
14
101
FFKPLLPGFRTHLNIPVAFFSKHVEGRNDQNKTARLRSDASDETWLVKMDGLKLTDGWEEFAFAHDLRIGDIVVFRHEGEMVFHVTAL
Cagra.1150s0033.1.p
B3
166
260
VRLVPCNLRKNLFNIPLTFARLNGLNKMRGKKIYLHNEEGRSWKLGLVHDKAGMHTYFKSGWRSFCTANGISQGRYTFQLVRKSAPPVIRLCRSN
Cagra.1150s0033.1.p
B3
273
369
CFKRHVSPSSLRYDQLYLPRSFVSSNGLDKRFGEIILKNEQGCKWPLVLKHSKPITTYLTKGWTNFCHVNGIKVGDFFKFKLAGTWEEPVLSLCPAE
Cagra.1150s0033.1.p
B3
484
581
FVANVTASSLIYDRLYLPLIFERSNGLHKMSGERIVLLDGEGRSWNLNLKYNEAGMHTYIRPGWTRFCDANGMSQGQKFTFKLVQKAAPPIMRLHLAK
Cagra.1150s0033.1.p
B3
594
691
YLVGSVTASSLTTDRLCLSRSFVRSSGLDKGYEEIVLENEWGKGWNLVLKHYKSCCSTILGGGWTTFCQDNGLKPGDSFKFKLVGTGERPVLSLFLAD
Cagra.1150s0033.1.p
B3
757
860
WKCRASSPSYTQDRFVTLTLTQSAFQTYKLMNGINKTGKITLLGQDGVKRVVDLFLDRICGRMRFGKGWREFCKAEGVKIDESFVLELIWEEEARPVFKFCTKV
Links
Other
B3
family TFs
Other
Capsella grandiflora
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AT1G26680
Arabidopsis thaliana
AT1G26680
N
0.719