Cagra.2093s0004 (Capsella grandiflora)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Cagra.2093s0004 T022776_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT1G51120
M01696_2.00
Arabidopsis thaliana
NNNNYRNNNN

NNNNYRNNNN
PBM
Weirauch et al.(2014)
pTH8659
0.832 0.832
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.2093s0004.1.p B3 181 287

Links

Other B3 family TFs
Other Capsella grandiflora TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R012134 Calypte anna Aan_R012134 I 0.000
Brh_R013532 Buceros rhinoceros Brh_R013532 I 0.000
CapteG139538 Capitella teleta CapteG139538 N 0.000
CLEC025153 Cimex lectularius CLEC025153 I 0.000
D915_09501 Fasciola hepatica D915_09501 I 0.000
D918_09737 Trichuris suis D918_09737 N 0.000
DILT_0001314701 Diphyllobothrium latum DILT_0001314701 N 0.000
PKNOX2 Choloepus hoffmanni ENSCHOG00000008048 I 0.000
MEIS3 Callithrix jacchus ENSCJAG00000011475 I 0.000
ENSCSAG00000007217 Chlorocebus sabaeus ENSCSAG00000007217 I 0.000
Pknox2 Dipodomys ordii ENSDORG00000008635 I 0.000
ENSMEUG00000003851 Macropus eugenii ENSMEUG00000003851 I 0.000
ENSMGAG00000015905 Meleagris gallopavo ENSMGAG00000015905 I 0.000
Meis3 Mus musculus ENSMUSG00000041420 D 0.000
Tgif2 Mus musculus ENSMUSG00000062175 D 0.000
ENSPANG00000019600 Papio anubis ENSPANG00000019600 I 0.000
PKNOX1 Procavia capensis ENSPCAG00000016718 I 0.000
ENSPMAG00000005538 Petromyzon marinus ENSPMAG00000005538 N 0.000
ENSPSIG00000016694 Pelodiscus sinensis ENSPSIG00000016694 N 0.000
MEIS2 Sorex araneus ENSSARG00000006585 I 0.000
MEIS2 Taeniopygia guttata ENSTGUG00000011748 I 0.000
LDEC001304 Leptinotarsa decemlineata LDEC001304 I 0.000
MCOS_0000352701 Mesocestoides corti MCOS_0000352701 N 0.000
PHUM547170 Pediculus humanus PHUM547170 I 0.000
Pvit_18888 Pogona vitticeps Pvit_18888 I 0.000
RO3G_00994 Rhizopus oryzae RO3G_00994 N 0.000
SCUD_0001235001 Schistosoma curassoni SCUD_0001235001 N 0.000
SPER_0001318201 Spirometra erinaceieuropaei SPER_0001318201 N 0.000
Tal_R002601 Tyto alba Tal_R002601 I 0.000
TRE_0000372801 Trichobilharzia regenti TRE_0000372801 N 0.000
TTRE_0000256401 Trichuris trichiura TTRE_0000256401 N 0.000