CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Carubv10011010m.g
(
Capsella rubella
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Carubv10011010m.g
T022854_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10011010m
B3
126
228
FMKILTASDTSTHGGLSVPKRSATECLPPLDMDIPVPTQDILTKDLHDSVWKFKHSFRGTPQRHLLTTGWSAFVTTKSLVAGDAFILLRGETGELRVGIRRAR
Links
Other
B3
family TFs
Other
Capsella rubella
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Carubv10012424m.g
Capsella rubella
Carubv10012424m.g
N
0.980
Carubv10011321m.g
Capsella rubella
Carubv10011321m.g
N
0.980
Carubv10019454m.g
Capsella rubella
Carubv10019454m.g
N
0.847
Bostr.15774s0314
Boechera stricta
Bostr.15774s0314
N
0.776
Bostr.1040s0030
Boechera stricta
Bostr.1040s0030
I
0.745
PDK_20s1651081g001
Phoenix dactylifera
PDK_20s1651081g001
I
0.721