CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10025359m.g
(
Capsella rubella
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Carubv10025359m.g
T022908_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10025359m
B3
22
125
ISKTLTRTDVDQHGRLLLPKSQVLTVLQKMNNVTQESLQNGIELEVLDMTKNHSYSVILKSRNASNDYVLATGWSTLKHSLELKEGDNIKLYWDYLNYKFIILN
Links
Other
B3
family TFs
Other
Capsella rubella
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cagra.27859s0001
Capsella grandiflora
Cagra.27859s0001
N
0.979
Carubv10025168m.g
Capsella rubella
Carubv10025168m.g
N
0.844
Cagra.7127s0002
Capsella grandiflora
Cagra.7127s0002
N
0.819
Carubv10024576m.g
Capsella rubella
Carubv10024576m.g
N
0.812
Cagra.4441s0002
Capsella grandiflora
Cagra.4441s0002
N
0.775
AT2G21920
Arabidopsis thaliana
AT2G21920
N
0.761
Bostr.5022s0042
Boechera stricta
Bostr.5022s0042
N
0.750
Carubv10024841m.g
Capsella rubella
Carubv10024841m.g
N
0.722
Cagra.6493s0001
Capsella grandiflora
Cagra.6493s0001
N
0.719
Carubv10003379m.g
Capsella rubella
Carubv10003379m.g
N
0.719