Ciclev10007286m.g (Citrus clementina)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Ciclev10007286m.g T022939_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ARF5
M06701_2.00
Arabidopsis thaliana
WYTTGTCGGN

NCCGACAARW
Dap-seq
OMalley et al.(2016)
MP_col
0.856 0.856
ARF8
M01697_2.00
Arabidopsis thaliana
NHTGTCGGN

NCCGACADN
PBM
Weirauch et al.(2014)
pTH8661
0.784 0.784
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10007286m B3 126 228

Links

Other B3 family TFs
Other Citrus clementina TFs

493 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ALNC14_068210 Albugo laibachii ALNC14_068210 N 0.000
F443_20688 Phytophthora parasitica F443_20688 N 0.000
fgenesh1_kg.C_scaffold_205000022 Phytophthora capsici fgenesh1_kg.C_scaffold_205000022 N 0.000
fgenesh_masked-par_contig_3894-abinit-gene-0.3 Pythium arrhenomanes fgenesh_masked-par_contig_3894-abinit-gene-0.3 N 0.000
fgenesh_scip_prom.46568.1466 Phytophthora kernoviae fgenesh_scip_prom.46568.1466 N 0.000
HpaG810852 Hyaloperonospora arabidopsidis HpaG810852 N 0.000
HpaG810853 Hyaloperonospora arabidopsidis HpaG810853 N 0.000
maker-pag1_scaffold_270-snap-gene-0.22 Pythium aphanidermatum maker-pag1_scaffold_270-snap-gene-0.22 N 0.000
maker-pir_contig_446-snap-gene-0.12 Pythium irregulare maker-pir_contig_446-snap-gene-0.12 N 0.000
maker-piw_contig_1287-fgenesh-gene-0.0 Pythium iwayamai maker-piw_contig_1287-fgenesh-gene-0.0 N 0.000
maker-pve_contig_498-fgenesh-gene-0.0 Pythium vexans maker-pve_contig_498-fgenesh-gene-0.0 N 0.000
Phyra80934 Phytophthora ramorum Phyra80934 N 0.000
Physo132948 Phytophthora sojae Physo132948 N 0.000
PITG_14416 Phytophthora infestans PITG_14416 N 0.000
PYU1_G002869 Pythium ultimum PYU1_G002869 N 0.000
SPRG_09499 Saprolegnia parasitica SPRG_09499 N 0.000