evm.TU.supercontig_261.2 (Carica papaya)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 evm.TU.supercontig_261.2 T023132_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF5
M06701_2.00 		Arabidopsis thaliana
WYTTGTCGGN
NCCGACAARW		 Dap-seq
OMalley et al.(2016)
MP_col 		0.704 0.704
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_261.2 B3 110 163

Links

Other B3 family TFs
Other Carica papaya TFs

83 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
chr6.CM0420.80.nd Lotus japonicus chr6.CM0420.80.nd I 0.909
29739.m003713 Ricinus communis 29739.m003713 I 0.833
POPTR_0006s14070 Populus trichocarpa POPTR_0006s14070 I 0.833
VIT_11s0016g00640 Vitis vinifera VIT_11s0016g00640 I 0.833
Pm027119 Prunus mume Pm027119 I 0.815
PRUPE_ppa000708mg Prunus persica PRUPE_ppa000708mg I 0.815
Gorai.010G091300 Gossypium raimondii Gorai.010G091300 I 0.815
Cucsa.117430 Cucumis sativus Cucsa.117430 N 0.789
OB06G15720 Oryza brachyantha OB06G15720 I 0.778
MTR_4g124900 Medicago truncatula MTR_4g124900 I 0.778
PGSC0003DMG401018664 Solanum tuberosum PGSC0003DMG401018664 I 0.771
MDP0000185253 Malus domestica MDP0000185253 I 0.759
PRUPE_ppa000479mg Prunus persica PRUPE_ppa000479mg I 0.759
Lus10033635.g Linum usitatissimum Lus10033635.g I 0.759
Pm008963 Prunus mume Pm008963 I 0.759
BRADI1G46602 Brachypodium distachyon BRADI1G46602 I 0.759
MTR_2g043250 Medicago truncatula MTR_2g043250 I 0.759
GLYMA01G00510 Glycine max GLYMA01G00510 I 0.759
PGSC0003DMG400003771 Solanum tuberosum PGSC0003DMG400003771 I 0.741
mgf012918m Mimulus guttatus mgf012918m I 0.741
Solyc04g081240.2 Solanum lycopersicum Solyc04g081240.2 I 0.741
AMTR_s00007p00267580 Amborella trichopoda AMTR_s00007p00267580 I 0.741
GSMUA_Achr5G05010_001 Musa acuminata GSMUA_Achr5G05010_001 I 0.741
Pavir.Cb00190 Panicum virgatum Pavir.Cb00190 I 0.735
PK26077.1 Cannabis sativa PK26077.1 I 0.722
29599.m000177 Ricinus communis 29599.m000177 I 0.722
Pm010467 Prunus mume Pm010467 I 0.722
Cla021128 Citrullus lanatus Cla021128 I 0.722
OGLUM08G22050 Oryza glumaepatula OGLUM08G22050 I 0.722
GSMUA_Achr11G01610_001 Musa acuminata GSMUA_Achr11G01610_001 I 0.722
cassava2408.valid.m1 Manihot esculenta cassava2408.valid.m1 I 0.722
gene30394-v1.0-hybrid Fragaria vesca gene30394-v1.0-hybrid I 0.722
AMTR_s00092p00072950 Amborella trichopoda AMTR_s00092p00072950 I 0.722
Gorai.008G097200 Gossypium raimondii Gorai.008G097200 I 0.722
Gorai.009G152700 Gossypium raimondii Gorai.009G152700 I 0.722
BGIOSGA026655 Oryza indica BGIOSGA026655 I 0.722
OMERI02G01870 Oryza meridionalis OMERI02G01870 I 0.722
OBART08G20780 Oryza barthii OBART08G20780 I 0.722
OPUNC08G18850 Oryza punctata OPUNC08G18850 I 0.722
MDP0000268306 Malus domestica MDP0000268306 I 0.722
ARF6 Vitis vinifera VIT_10s0003g04100 I 0.722
ORUFI08G23260 Oryza rufipogon ORUFI08G23260 I 0.722
PRUPE_ppa001179mg Prunus persica PRUPE_ppa001179mg I 0.722
TCM_029410 Theobroma cacao TCM_029410 I 0.722
MDP0000232417 Malus domestica MDP0000232417 I 0.722
MDP0000143749 Malus domestica MDP0000143749 I 0.722
ORGLA08G0183900 Oryza glaberrima ORGLA08G0183900 I 0.722
OS08G0520550 Oryza sativa OS08G0520550 I 0.722
ONIVA08G23730 Oryza nivara ONIVA08G23730 I 0.722
SapurV1A.0025s0600 Salix purpurea SapurV1A.0025s0600 I 0.706
Aquca_002_01425 Aquilegia coerulea Aquca_002_01425 I 0.704
Ciclev10014200m.g Citrus clementina Ciclev10014200m.g I 0.704
Lus10024320.g Linum usitatissimum Lus10024320.g I 0.704
SapurV1A.0147s0210 Salix purpurea SapurV1A.0147s0210 I 0.704
Lus10031354.g Linum usitatissimum Lus10031354.g I 0.704
SapurV1A.0289s0180 Salix purpurea SapurV1A.0289s0180 I 0.704
orange1.1g002390m.g Citrus sinensis orange1.1g002390m.g I 0.704
Lus10010969.g Linum usitatissimum Lus10010969.g I 0.704
Lus10007386.g Linum usitatissimum Lus10007386.g I 0.704
Cla009963 Citrullus lanatus Cla009963 I 0.704
Solyc02g037530.2 Solanum lycopersicum Solyc02g037530.2 I 0.704
TCM_017488 Theobroma cacao TCM_017488 I 0.704
Traes_7AS_582E3076D Triticum aestivum Traes_7AS_582E3076D I 0.704
Traes_7BS_F44A273F8 Triticum aestivum Traes_7BS_F44A273F8 I 0.704
SELMODRAFT_451392 Selaginella moellendorffii SELMODRAFT_451392 I 0.704
SELMODRAFT_179736 Selaginella moellendorffii SELMODRAFT_179736 I 0.704
MLOC_14584 Hordeum vulgare MLOC_14584 I 0.704
MTR_1g024025 Medicago truncatula MTR_1g024025 I 0.704
MTR_5g076270 Medicago truncatula MTR_5g076270 I 0.704
POPTR_0017s01870 Populus trichocarpa POPTR_0017s01870 I 0.704
Traes_7DS_1948388F8 Triticum aestivum Traes_7DS_1948388F8 I 0.704
Ca_05025 Cicer arietinum Ca_05025 I 0.704
cassava32201.m1 Manihot esculenta cassava32201.m1 I 0.704
cassava35541.valid.m1 Manihot esculenta cassava35541.valid.m1 I 0.704
Cucsa.047990 Cucumis sativus Cucsa.047990 I 0.704
mgf005961m Mimulus guttatus mgf005961m I 0.704
cassava30266.valid.m1 Manihot esculenta cassava30266.valid.m1 I 0.704
cassava30265.valid.m1 Manihot esculenta cassava30265.valid.m1 I 0.704
Ca_15694 Cicer arietinum Ca_15694 I 0.704
29769.m000463 Ricinus communis 29769.m000463 I 0.704
cassava29103.valid.m1 Manihot esculenta cassava29103.valid.m1 I 0.704
cassava29104.valid.m1 Manihot esculenta cassava29104.valid.m1 I 0.704
mgf007038m Mimulus guttatus mgf007038m I 0.704