Pavir.Fb00403 (Panicum virgatum)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Pavir.Fb00403 T023856_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Fb00403.1.p B3 54 151

Links

Other B3 family TFs
Other Panicum virgatum TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Si014362m.g Setaria italica Si014362m.g N 0.949
ORGLA08G0028800 Oryza glaberrima ORGLA08G0028800 N 0.896
ORUFI08G03850 Oryza rufipogon ORUFI08G03850 N 0.896
OS08G0157700 Oryza sativa OS08G0157700 N 0.896
OGLUM08G03520 Oryza glumaepatula OGLUM08G03520 N 0.896
ONIVA08G03420 Oryza nivara ONIVA08G03420 N 0.896
BGIOSGA028020 Oryza indica BGIOSGA028020 N 0.896
OMERI08G03480 Oryza meridionalis OMERI08G03480 N 0.888
OPUNC08G03290 Oryza punctata OPUNC08G03290 N 0.884
Sb07g003880 Sorghum bicolor Sb07g003880 N 0.878
Traes_2DL_896E50180 Triticum aestivum Traes_2DL_896E50180 I 0.857
GRMZM2G180168 Zea mays GRMZM2G180168 N 0.856
LPERR08G03490 Leersia perrieri LPERR08G03490 N 0.777
OBART08G03440 Oryza barthii OBART08G03440 N 0.755
Traes_2AL_41E2E66D9 Triticum aestivum Traes_2AL_41E2E66D9 I 0.753
Pavir.Ib00059 Panicum virgatum Pavir.Ib00059 N 0.745
Pavir.Ia04549 Panicum virgatum Pavir.Ia04549 N 0.745
Si036864m.g Setaria italica Si036864m.g N 0.735
OPUNC04G20430 Oryza punctata OPUNC04G20430 I 0.730
BRADI3G16500 Brachypodium distachyon BRADI3G16500 N 0.724
OPUNC10G16940 Oryza punctata OPUNC10G16940 N 0.724
OBART10G17010 Oryza barthii OBART10G17010 N 0.724
BGIOSGA031489 Oryza indica BGIOSGA031489 N 0.724
ORUFI10G18030 Oryza rufipogon ORUFI10G18030 N 0.724
OB03G11610 Oryza brachyantha OB03G11610 N 0.724
OS10G0537100 Oryza sativa OS10G0537100 N 0.724
ONIVA10G18740 Oryza nivara ONIVA10G18740 N 0.724
ORGLA10G0119700 Oryza glaberrima ORGLA10G0119700 N 0.724
OGLUM10G17040 Oryza glumaepatula OGLUM10G17040 N 0.724
GRMZM2G082227 Zea mays GRMZM2G082227 N 0.723
OB10G24100 Oryza brachyantha OB10G24100 N 0.718
LPERR10G12990 Leersia perrieri LPERR10G12990 N 0.714
LPERR06G00460 Leersia perrieri LPERR06G00460 N 0.714
Traes_4BL_D9784B20C1 Triticum aestivum Traes_4BL_D9784B20C1 N 0.713
Sb01g049150 Sorghum bicolor Sb01g049150 N 0.713
Pavir.J27608 Panicum virgatum Pavir.J27608 N 0.705
BGIOSGA014498 Oryza indica BGIOSGA014498 I 0.704
LPERR04G18630 Leersia perrieri LPERR04G18630 N 0.704
OPUNC06G00440 Oryza punctata OPUNC06G00440 N 0.704
ONIVA04G22030 Oryza nivara ONIVA04G22030 I 0.704
OMERI03G01600 Oryza meridionalis OMERI03G01600 N 0.703
BRADI1G77150 Brachypodium distachyon BRADI1G77150 N 0.703
ORGLA03G0014300 Oryza glaberrima ORGLA03G0014300 N 0.703
BGIOSGA011738 Oryza indica BGIOSGA011738 N 0.703
GRMZM2G018485 Zea mays GRMZM2G018485 N 0.703
OPUNC03G01540 Oryza punctata OPUNC03G01540 N 0.703
ONIVA02G30750 Oryza nivara ONIVA02G30750 N 0.703
OBART03G01650 Oryza barthii OBART03G01650 N 0.703
OS03G0120900 Oryza sativa OS03G0120900 N 0.703
OGLUM03G01630 Oryza glumaepatula OGLUM03G01630 N 0.703
OMERI10G13480 Oryza meridionalis OMERI10G13480 N 0.703
TRIUR3_06598 Triticum urartu TRIUR3_06598 N 0.701
SapurV1A.0666s0090 Salix purpurea SapurV1A.0666s0090 I 0.700