CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Ib03958
(
Panicum virgatum
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Pavir.Ib03958
T023915_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ib03958.1.p
B3
41
131
FFRRMDANSKHSLIVPNRFVKRFAGKLSGRIKLESPNGTLHNVEVIERYDKMVLQRGWEAFVDANHIKENNFMLFRRIEKSRFEVLILESD
Pavir.Ib03958.1.p
B3
256
356
FVSIMRKCNVQSSGPYLVISKEYALAHFPHETTYLTLQRPSKSKKWHPRFYIRNDRRVYMLRGQWLDFVRDNHVQEGDICLLLPAKTGRKFTLTVYLLRAT
Pavir.Ib03958.1.p
B3
455
552
YIVIMKSSSVVVSKQMLEFGAHYAAAYLPAREQTMVLQCNGKTWNTDMVIRNGSRLFLRGGWPKFVCDNGLRVGDICLFEQKKNESKLTMEVHVISRE
Pavir.Ib03958.2.p
B3
33
123
FFRRMDANSKHSLIVPNRFVKRFAGKLSGRIKLESPNGTLHNVEVIERYDKMVLQRGWEAFVDANHIKENNFMLFRRIEKSRFEVLILESD
Pavir.Ib03958.2.p
B3
248
348
FVSIMRKCNVQSSGPYLVISKEYALAHFPHETTYLTLQRPSKSKKWHPRFYIRNDRRVYMLRGQWLDFVRDNHVQEGDICLLLPAKTGRKFTLTVYLLRAT
Pavir.Ib03958.2.p
B3
447
544
YIVIMKSSSVVVSKQMLEFGAHYAAAYLPAREQTMVLQCNGKTWNTDMVIRNGSRLFLRGGWPKFVCDNGLRVGDICLFEQKKNESKLTMEVHVISRE
Pavir.Ib03958.3.p
B3
6
81
IAWFVKRFAGKLSGRIKLESPNGTLHNVEVIERYDKMVLQRGWEAFVDANHIKENNFMLFRRIEKSRFEVLILESD
Pavir.Ib03958.3.p
B3
206
306
FVSIMRKCNVQSSGPYLVISKEYALAHFPHETTYLTLQRPSKSKKWHPRFYIRNDRRVYMLRGQWLDFVRDNHVQEGDICLLLPAKTGRKFTLTVYLLRAT
Pavir.Ib03958.3.p
B3
405
502
YIVIMKSSSVVVSKQMLEFGAHYAAAYLPAREQTMVLQCNGKTWNTDMVIRNGSRLFLRGGWPKFVCDNGLRVGDICLFEQKKNESKLTMEVHVISRE
Pavir.Ib03958.4.p
B3
1
40
MVLQRGWEAFVDANHIKENNFMLFRRIEKSRFEVLILESD
Pavir.Ib03958.4.p
B3
165
265
FVSIMRKCNVQSSGPYLVISKEYALAHFPHETTYLTLQRPSKSKKWHPRFYIRNDRRVYMLRGQWLDFVRDNHVQEGDICLLLPAKTGRKFTLTVYLLRAT
Pavir.Ib03958.4.p
B3
364
461
YIVIMKSSSVVVSKQMLEFGAHYAAAYLPAREQTMVLQCNGKTWNTDMVIRNGSRLFLRGGWPKFVCDNGLRVGDICLFEQKKNESKLTMEVHVISRE
Links
Other
B3
family TFs
Other
Panicum virgatum
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Ia01278
Panicum virgatum
Pavir.Ia01278
N
0.940
Si039191m.g
Setaria italica
Si039191m.g
N
0.726