Thhalv10012161m.g (Eutrema salsugineum)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Thhalv10012161m.g T024238_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT1G51120
M01696_2.00
Arabidopsis thaliana
NNNNYRNNNN

NNNNYRNNNN
PBM
Weirauch et al.(2014)
pTH8659
0.755 0.755
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10012161m B3 154 264

Links

Other B3 family TFs
Other Eutrema salsugineum TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
fgenesh2_kg.1__4181__AT1G51120.1 Arabidopsis lyrata fgenesh2_kg.1__4181__AT1G51120.1 I 0.740
fgenesh2_kg.1__4154__AT1G50680.1 Arabidopsis lyrata fgenesh2_kg.1__4154__AT1G50680.1 I 0.711
AT1G50680 Arabidopsis thaliana AT1G50680 I 0.708
AT1G51120 Arabidopsis thaliana AT1G51120 D 0.740
Bostr.26675s0076 Boechera stricta Bostr.26675s0076 I 0.745
Bo5g081270 Brassica oleracea Bo5g081270 I 0.719
Bo6g022280 Brassica oleracea Bo6g022280 I 0.758
Bo6g022450 Brassica oleracea Bo6g022450 I 0.766
Bo6g022460 Brassica oleracea Bo6g022460 I 0.713
Bra030458 Brassica rapa Bra030458 I 0.729
Bra018869 Brassica rapa Bra018869 I 0.742
Bra018854 Brassica rapa Bra018854 I 0.732
Cagra.2093s0004 Capsella grandiflora Cagra.2093s0004 I 0.758
Carubv10011592m.g Capsella rubella Carubv10011592m.g I 0.758
Thhalv10012152m.g Eutrema salsugineum Thhalv10012152m.g I 0.776
Thhalv10012356m.g Eutrema salsugineum Thhalv10012356m.g I 0.745