Thhalv10016394m.g (Eutrema salsugineum)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Thhalv10016394m.g T024254_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ARF3
M00852_2.00
Arabidopsis thaliana
NKGTYBNN

NNVRACMN
PBM
Franco-Zorrilla et al.(2014)
ETTIN
1.000 1.000
ARF2
M06714_2.00
Arabidopsis thaliana
NHTGTCKSHD

HDSMGACADN
Dap-seq
OMalley et al.(2016)
ARF2_col_v31
0.714 0.714
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10016394m B3 161 263

Links

Other B3 family TFs
Other Eutrema salsugineum TFs

442 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SNOG_04486 Stagonospora nodorum SNOG_04486 I 0.000
GLRG_01353 Colletotrichum graminicola GLRG_01353 I 0.000
MPH_00439 Macrophomina phaseolina MPH_00439 I 0.000
MYCTH_2297012 Myceliophthora thermophila MYCTH_2297012 I 0.000
THITE_2112457 Thielavia terrestris THITE_2112457 I 0.000
TRIREDRAFT_73654 Trichoderma reesei TRIREDRAFT_73654 I 0.000
TRIVIDRAFT_212339 Trichoderma virens TRIVIDRAFT_212339 I 0.000
UCRNP2_4189 Neofusicoccum parvum UCRNP2_4189 I 0.000
UCRPA7_6727 Togninia minima UCRPA7_6727 I 0.000
UV8b_4299 Ustilaginoidea virens UV8b_4299 I 0.000
W97_01077 Coniosporium apollinis W97_01077 I 0.000
FPSE_04421 Fusarium pseudograminearum FPSE_04421 I 0.000
FGRRES_00515 Fusarium graminearum FGRRES_00515 I 0.000
CSUB01_03595 Colletotrichum sublineola CSUB01_03595 I 0.000
ACRE_062880 Acremonium chrysogenum ACRE_062880 I 0.000
CGGC5_7534 Colletotrichum gloeosporioides CGGC5_7534 I 0.000
CH063_11966 Colletotrichum higginsianum CH063_11966 I 0.000
CMQ_48 Grosmannia clavigera CMQ_48 I 0.000
Cob_12403 Colletotrichum orbiculare Cob_12403 I 0.000
estExt_fgenesh1_pg.C_30275 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_30275 N 0.000
COCC4DRAFT_21340 Bipolaris maydis COCC4DRAFT_21340 N 0.000
COCMIDRAFT_89716 Bipolaris oryzae COCMIDRAFT_89716 N 0.000
SETTUDRAFT_28486 Setosphaeria turcica SETTUDRAFT_28486 N 0.000
PTT_12768 Pyrenophora teres PTT_12768 N 0.000
PTRG_07536 Pyrenophora triticirepentis PTRG_07536 N 0.000
COCSADRAFT_92985 Bipolaris sorokiniana COCSADRAFT_92985 N 0.000
COCVIDRAFT_94504 Bipolaris victoriae COCVIDRAFT_94504 N 0.000
AB03358.1 Alternaria brassicicola AB03358.1 N 0.000