PDK_20s1535431g002 (Phoenix dactylifera)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 PDK_20s1535431g002 T024476_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF8
M01697_2.00 		Arabidopsis thaliana
NHTGTCGGN
NCCGACADN		 PBM
Weirauch et al.(2014)
pTH8661 		0.730 0.730
ARF5
M06701_2.00 		Arabidopsis thaliana
WYTTGTCGGN
NCCGACAARW		 Dap-seq
OMalley et al.(2016)
MP_col 		0.730 0.730
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PDK_20s1535431g002 B3 18 106

Links

Other B3 family TFs
Other Phoenix dactylifera TFs

222 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
chr6.CM0420.80.nd Lotus japonicus chr6.CM0420.80.nd I 0.909
VIT_11s0016g00640 Vitis vinifera VIT_11s0016g00640 I 0.831
29739.m003713 Ricinus communis 29739.m003713 I 0.831
POPTR_0006s14070 Populus trichocarpa POPTR_0006s14070 I 0.831
Pm027119 Prunus mume Pm027119 I 0.820
Gorai.010G091300 Gossypium raimondii Gorai.010G091300 I 0.820
MTR_4g124900 Medicago truncatula MTR_4g124900 I 0.820
PRUPE_ppa000708mg Prunus persica PRUPE_ppa000708mg I 0.820
OB06G15720 Oryza brachyantha OB06G15720 I 0.809
BRADI1G46602 Brachypodium distachyon BRADI1G46602 I 0.798
Traes_7BS_F44A273F8 Triticum aestivum Traes_7BS_F44A273F8 I 0.787
Traes_7DS_1948388F8 Triticum aestivum Traes_7DS_1948388F8 I 0.787
Traes_7AS_582E3076D Triticum aestivum Traes_7AS_582E3076D I 0.787
mgf012918m Mimulus guttatus mgf012918m I 0.787
PRUPE_ppa000479mg Prunus persica PRUPE_ppa000479mg I 0.787
MDP0000185253 Malus domestica MDP0000185253 I 0.787
Lus10033635.g Linum usitatissimum Lus10033635.g I 0.787
GSMUA_Achr5G05010_001 Musa acuminata GSMUA_Achr5G05010_001 I 0.787
MTR_2g043250 Medicago truncatula MTR_2g043250 I 0.787
MLOC_14584 Hordeum vulgare MLOC_14584 I 0.787
Pm008963 Prunus mume Pm008963 I 0.787
OPUNC08G18850 Oryza punctata OPUNC08G18850 I 0.775
PK26077.1 Cannabis sativa PK26077.1 I 0.775
ONIVA08G23730 Oryza nivara ONIVA08G23730 I 0.775
OMERI02G01870 Oryza meridionalis OMERI02G01870 I 0.775
ORGLA08G0183900 Oryza glaberrima ORGLA08G0183900 I 0.775
OBART08G20780 Oryza barthii OBART08G20780 I 0.775
MDP0000268306 Malus domestica MDP0000268306 I 0.775
OGLUM08G22050 Oryza glumaepatula OGLUM08G22050 I 0.775
PRUPE_ppa001179mg Prunus persica PRUPE_ppa001179mg I 0.775
Gorai.009G152700 Gossypium raimondii Gorai.009G152700 I 0.775
29599.m000177 Ricinus communis 29599.m000177 I 0.775
gene30394-v1.0-hybrid Fragaria vesca gene30394-v1.0-hybrid I 0.775
cassava2408.valid.m1 Manihot esculenta cassava2408.valid.m1 I 0.775
Pm010467 Prunus mume Pm010467 I 0.775
ARF6 Vitis vinifera VIT_10s0003g04100 I 0.775
OS08G0520550 Oryza sativa OS08G0520550 I 0.775
MDP0000232417 Malus domestica MDP0000232417 I 0.775
AMTR_s00007p00267580 Amborella trichopoda AMTR_s00007p00267580 I 0.775
ORUFI08G23260 Oryza rufipogon ORUFI08G23260 I 0.775
TCM_029410 Theobroma cacao TCM_029410 I 0.775
BGIOSGA026655 Oryza indica BGIOSGA026655 I 0.775
AMTR_s00092p00072950 Amborella trichopoda AMTR_s00092p00072950 I 0.775
cassava29104.valid.m1 Manihot esculenta cassava29104.valid.m1 I 0.764
cassava30266.valid.m1 Manihot esculenta cassava30266.valid.m1 I 0.764
cassava29103.valid.m1 Manihot esculenta cassava29103.valid.m1 I 0.764
cassava30265.valid.m1 Manihot esculenta cassava30265.valid.m1 I 0.764
Cla009963 Citrullus lanatus Cla009963 I 0.764
POPTR_0017s01870 Populus trichocarpa POPTR_0017s01870 I 0.764
Solyc04g081240.2 Solanum lycopersicum Solyc04g081240.2 I 0.764
TCM_017488 Theobroma cacao TCM_017488 I 0.764
cassava32201.m1 Manihot esculenta cassava32201.m1 I 0.764
29769.m000463 Ricinus communis 29769.m000463 I 0.764
Cucsa.047990 Cucumis sativus Cucsa.047990 I 0.764
Lus10024320.g Linum usitatissimum Lus10024320.g I 0.764
Lus10031354.g Linum usitatissimum Lus10031354.g I 0.764
MDP0000143749 Malus domestica MDP0000143749 I 0.764
SapurV1A.0147s0210 Salix purpurea SapurV1A.0147s0210 I 0.764
Lus10010969.g Linum usitatissimum Lus10010969.g I 0.764
Lus10007386.g Linum usitatissimum Lus10007386.g I 0.764
PGSC0003DMG400003771 Solanum tuberosum PGSC0003DMG400003771 I 0.764
mgf005961m Mimulus guttatus mgf005961m I 0.764
Aquca_002_01425 Aquilegia coerulea Aquca_002_01425 I 0.764
cassava35541.valid.m1 Manihot esculenta cassava35541.valid.m1 I 0.764
Ca_15694 Cicer arietinum Ca_15694 I 0.764
MTR_5g076270 Medicago truncatula MTR_5g076270 I 0.764
GRMZM2G317900 Zea mays GRMZM2G317900 I 0.764
GSMUA_Achr11G01610_001 Musa acuminata GSMUA_Achr11G01610_001 I 0.764
PGSC0003DMG401018664 Solanum tuberosum PGSC0003DMG401018664 I 0.760
Pavir.Cb00190 Panicum virgatum Pavir.Cb00190 I 0.755
Gorai.008G097200 Gossypium raimondii Gorai.008G097200 I 0.753
GSMUA_Achr11G25770_001 Musa acuminata GSMUA_Achr11G25770_001 I 0.753
Si013155m.g Setaria italica Si013155m.g I 0.753
Cucsa.152170 Cucumis sativus Cucsa.152170 I 0.753
Ca_05025 Cicer arietinum Ca_05025 I 0.753
Cla019844 Citrullus lanatus Cla019844 I 0.753
Cla021128 Citrullus lanatus Cla021128 I 0.753
SapurV1A.0289s0180 Salix purpurea SapurV1A.0289s0180 I 0.753
SapurV1A.0030s0180 Salix purpurea SapurV1A.0030s0180 I 0.753
GLYMA01G00510 Glycine max GLYMA01G00510 I 0.753
SapurV1A.0521s0030 Salix purpurea SapurV1A.0521s0030 I 0.745
GSMUA_Achr9G18170_001 Musa acuminata GSMUA_Achr9G18170_001 I 0.745
TCM_037484 Theobroma cacao TCM_037484 I 0.745
Eucgr.C03293 Eucalyptus grandis Eucgr.C03293 I 0.745
Solyc02g037530.2 Solanum lycopersicum Solyc02g037530.2 I 0.742
Traes_7BL_66296695F Triticum aestivum Traes_7BL_66296695F I 0.742
Traes_7DL_C89614A4D Triticum aestivum Traes_7DL_C89614A4D I 0.742
Bra028110 Brassica rapa Bra028110 I 0.742
Ca_10748 Cicer arietinum Ca_10748 I 0.742
mgf007038m Mimulus guttatus mgf007038m I 0.742
orange1.1g001728m.g Citrus sinensis orange1.1g001728m.g I 0.742
orange1.1g002390m.g Citrus sinensis orange1.1g002390m.g I 0.742
chr4.CM0006.290.nc Lotus japonicus chr4.CM0006.290.nc I 0.742
LjSGA_069146.1 Lotus japonicus LjSGA_069146.1 I 0.742
Bo4g136370 Brassica oleracea Bo4g136370 I 0.742
Ciclev10014200m.g Citrus clementina Ciclev10014200m.g I 0.742
MTR_1g024025 Medicago truncatula MTR_1g024025 I 0.742
MLOC_58330 Hordeum vulgare MLOC_58330 I 0.742
SELMODRAFT_451392 Selaginella moellendorffii SELMODRAFT_451392 I 0.742
Ciclev10007286m.g Citrus clementina Ciclev10007286m.g I 0.742
GRMZM2G102845 Zea mays GRMZM2G102845 I 0.742
OB12G25550 Oryza brachyantha OB12G25550 I 0.742
Sb04g003240 Sorghum bicolor Sb04g003240 I 0.742
SELMODRAFT_179736 Selaginella moellendorffii SELMODRAFT_179736 I 0.742
GLYMA05G36430 Glycine max GLYMA05G36430 I 0.742
Cucsa.117430 Cucumis sativus Cucsa.117430 N 0.737
Cagra.1961s0078 Capsella grandiflora Cagra.1961s0078 I 0.735
Carubv10008159m.g Capsella rubella Carubv10008159m.g I 0.735
gene12917-v1.0-hybrid Fragaria vesca gene12917-v1.0-hybrid I 0.735
ORUFI06G06450 Oryza rufipogon ORUFI06G06450 I 0.735
Cagra.1796s0004 Capsella grandiflora Cagra.1796s0004 I 0.735
Bostr.26527s0132 Boechera stricta Bostr.26527s0132 I 0.735
OGLUM06G06490 Oryza glumaepatula OGLUM06G06490 I 0.735
GRMZM2G160005 Zea mays GRMZM2G160005 I 0.735
OS06G0196700 Oryza sativa OS06G0196700 I 0.735
Bostr.7128s0527 Boechera stricta Bostr.7128s0527 I 0.735
ORGLA06G0056900 Oryza glaberrima ORGLA06G0056900 I 0.735
OMERI03G32190 Oryza meridionalis OMERI03G32190 I 0.735
ONIVA06G07160 Oryza nivara ONIVA06G07160 I 0.735
Thhalv10006635m.g Eutrema salsugineum Thhalv10006635m.g I 0.735
Thhalv10012513m.g Eutrema salsugineum Thhalv10012513m.g I 0.735
AMTR_s00025p00198750 Amborella trichopoda AMTR_s00025p00198750 I 0.735
OLONG_009780 Oryza longistaminata OLONG_009780 I 0.735
OPUNC06G05940 Oryza punctata OPUNC06G05940 I 0.735
MDP0000876321 Malus domestica MDP0000876321 I 0.735
LPERR06G05720 Leersia perrieri LPERR06G05720 I 0.735
GLYMA15G19980 Glycine max GLYMA15G19980 I 0.735
ARF16 Oryza indica BGIOSGA022468 I 0.735
NPH4 Arabidopsis thaliana AT5G20730 I 0.735
ARF19 Arabidopsis thaliana AT1G19220 I 0.735
OBART06G06150 Oryza barthii OBART06G06150 I 0.735
Bo5g027250 Brassica oleracea Bo5g027250 I 0.735
TRIUR3_33045 Triticum urartu TRIUR3_33045 I 0.735
Bra025720 Brassica rapa Bra025720 I 0.735
Traes_7DS_7375BED72 Triticum aestivum Traes_7DS_7375BED72 I 0.735
F775_12532 Aegilops tauschii F775_12532 I 0.735
Sb10g006440 Sorghum bicolor Sb10g006440 I 0.735
NPH4 Arabidopsis lyrata fgenesh2_kg.6__2115__AT5G20730.1 I 0.735
GLYMA09G08350 Glycine max GLYMA09G08350 I 0.735
Traes_7BS_3FD792335 Triticum aestivum Traes_7BS_3FD792335 I 0.735
PK17611.1 Cannabis sativa PK17611.1 I 0.732
Cla017138 Citrullus lanatus Cla017138 I 0.732
cassava7809.valid.m1 Manihot esculenta cassava7809.valid.m1 I 0.732
SapurV1A.0355s0030 Salix purpurea SapurV1A.0355s0030 I 0.730
Sb08g021460 Sorghum bicolor Sb08g021460 I 0.730
Gorai.009G037100 Gossypium raimondii Gorai.009G037100 I 0.724
Bra020125 Brassica rapa Bra020125 I 0.724
Bra002327 Brassica rapa Bra002327 I 0.724
BRADI3G40437 Brachypodium distachyon BRADI3G40437 I 0.724
Pavir.Db01975 Panicum virgatum Pavir.Db01975 I 0.724
Si005753m.g Setaria italica Si005753m.g I 0.724
SapurV1A.0001s2530 Salix purpurea SapurV1A.0001s2530 I 0.724
Pavir.Da01885 Panicum virgatum Pavir.Da01885 I 0.724
MDP0000886637 Malus domestica MDP0000886637 I 0.724
Bo2g023110 Brassica oleracea Bo2g023110 I 0.724
Bo8g068380 Brassica oleracea Bo8g068380 I 0.724
cassava25060.valid.m1 Manihot esculenta cassava25060.valid.m1 I 0.724
GLYMA17G05220 Glycine max GLYMA17G05220 I 0.722
Ca_03128 Cicer arietinum Ca_03128 I 0.722
Solyc07g042260.2 Solanum lycopersicum Solyc07g042260.2 I 0.722
GLYMA13G17270 Glycine max GLYMA13G17270 I 0.722
Traes_2DL_FBE64209C Triticum aestivum Traes_2DL_FBE64209C I 0.719
GSMUA_Achr6G19850_001 Musa acuminata GSMUA_Achr6G19850_001 I 0.719
Sb07g027080 Sorghum bicolor Sb07g027080 I 0.719
Traes_2BL_E322FD546 Triticum aestivum Traes_2BL_E322FD546 I 0.719
Sb06g031900 Sorghum bicolor Sb06g031900 I 0.719
Traes_2AL_05ECC440C Triticum aestivum Traes_2AL_05ECC440C I 0.719
Lus10033597.g Linum usitatissimum Lus10033597.g I 0.719
GRMZM2G081158 Zea mays GRMZM2G081158 I 0.719
Lus10017640.g Linum usitatissimum Lus10017640.g I 0.719
GRMZM2G086949 Zea mays GRMZM2G086949 I 0.719
GRMZM2G034840 Zea mays GRMZM2G034840 I 0.719
MLOC_55345 Hordeum vulgare MLOC_55345 I 0.719
OLONG_008746 Oryza longistaminata OLONG_008746 N 0.717
Aquca_018_00174 Aquilegia coerulea Aquca_018_00174 I 0.714
Lus10027600.g Linum usitatissimum Lus10027600.g I 0.714
Lus10022943.g Linum usitatissimum Lus10022943.g I 0.714
Pavir.J00164 Panicum virgatum Pavir.J00164 I 0.714
GSMUA_Achr9G14090_001 Musa acuminata GSMUA_Achr9G14090_001 I 0.714
Si005741m.g Setaria italica Si005741m.g I 0.714
Bo9g151530 Brassica oleracea Bo9g151530 I 0.714
TCM_039715 Theobroma cacao TCM_039715 I 0.714
POPTR_0018s07420 Populus trichocarpa POPTR_0018s07420 I 0.714
orange1.1g001969m.g Citrus sinensis orange1.1g001969m.g I 0.714
gene08492-v1.0-hybrid Fragaria vesca gene08492-v1.0-hybrid I 0.714
Ciclev10007292m.g Citrus clementina Ciclev10007292m.g I 0.714
Cla005884 Citrullus lanatus Cla005884 I 0.714
Ca_19289 Cicer arietinum Ca_19289 I 0.714
Cucsa.071070 Cucumis sativus Cucsa.071070 I 0.714
Pavir.Db00232 Panicum virgatum Pavir.Db00232 I 0.714
MTR_8g101360 Medicago truncatula MTR_8g101360 I 0.714
POPTR_0006s07740 Populus trichocarpa POPTR_0006s07740 I 0.714
cassava44112.valid.m1 Manihot esculenta cassava44112.valid.m1 I 0.714
Bo6g099440 Brassica oleracea Bo6g099440 I 0.708
Bra004125 Brassica rapa Bra004125 I 0.708
OB06G34290 Oryza brachyantha OB06G34290 I 0.704
30185.m000956 Ricinus communis 30185.m000956 I 0.704
chr2.CM0373.570.nc Lotus japonicus chr2.CM0373.570.nc I 0.704
PK20354.1 Cannabis sativa PK20354.1 I 0.704
ONIVA06G29090 Oryza nivara ONIVA06G29090 I 0.704
OMERI06G26660 Oryza meridionalis OMERI06G26660 I 0.704
OPUNC06G24250 Oryza punctata OPUNC06G24250 I 0.704
ORUFI06G28510 Oryza rufipogon ORUFI06G28510 I 0.704
Eucgr.C02178 Eucalyptus grandis Eucgr.C02178 I 0.704
GLYMA15G09750 Glycine max GLYMA15G09750 I 0.704
GLYMA02G40650 Glycine max GLYMA02G40650 I 0.704
VIT_11s0065g00310 Vitis vinifera VIT_11s0065g00310 I 0.704
OS06G0702600 Oryza sativa OS06G0702600 I 0.704
MP Vitis vinifera VIT_18s0001g13930 I 0.704
GLYMA14G38940 Glycine max GLYMA14G38940 I 0.704
OBART06G26550 Oryza barthii OBART06G26550 I 0.704
gene12224-v1.0-hybrid Fragaria vesca gene12224-v1.0-hybrid I 0.704
GLYMA13G29320 Glycine max GLYMA13G29320 I 0.704
BGIOSGA023559 Oryza indica BGIOSGA023559 I 0.704
MDP0000211459 Malus domestica MDP0000211459 I 0.704
LPERR06G22130 Leersia perrieri LPERR06G22130 I 0.704
ORGLA06G0221800 Oryza glaberrima ORGLA06G0221800 I 0.704
GSMUA_Achr3G10240_001 Musa acuminata GSMUA_Achr3G10240_001 I 0.704
OGLUM06G27960 Oryza glumaepatula OGLUM06G27960 I 0.704
LPERR08G17530 Leersia perrieri LPERR08G17530 I 0.704
PDK_20s1410001g001 Phoenix dactylifera PDK_20s1410001g001 I 0.701
PGSC0003DMG400002392 Solanum tuberosum PGSC0003DMG400002392 I 0.701