CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Si006972m.g
(
Setaria italica
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF06217 (GAGA_bind)
IPR010409
Si006972m.g
T024734_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si006972m
BBR
1
304
MMPQLKDHHSMNLLALMNEKDSAIRERDHALAEKKAAIAERDMAFAQRDAAMAERNAAIVERDNALAALELARTNGFNMNNGNGFHQVPPLNGTKNIHNHDQLSHVQTSPLQLADSPYDHTREMHISEAYPIATAPSSIGKGKKPRKNSSQASPLKRPSGVLRKTKKVAGDWKNGGMSGGGEDSARASVMKNEWKDQDLGLNQVPFDESTMPAPACSCTGELRQCYKWGNGGWQSSCCTMSMSMYPLPVMPNRRHARMGGRKMSGSAFTKLLSRLAAEGHDLSTPVDLKDHWAKHGTNRYITIR
Links
Other
BBR
family TFs
Other
Setaria italica
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
C1orf35
Otolemur garnettii
ENSOGAG00000010978
I
1.000
RGD1304587
Rattus norvegicus
ENSRNOG00000002944
I
1.000
Traes_7DS_FE8BC1125
Triticum aestivum
Traes_7DS_FE8BC1125
N
0.877
MLOC_15776
Hordeum vulgare
MLOC_15776
N
0.866
TRIUR3_11677
Triticum urartu
TRIUR3_11677
N
0.854
OLONG_020703
Oryza longistaminata
OLONG_020703
N
0.847
ONIVA06G02210
Oryza nivara
ONIVA06G02210
N
0.844
ORUFI06G01870
Oryza rufipogon
ORUFI06G01870
N
0.844
ORGLA06G0019100
Oryza glaberrima
ORGLA06G0019100
N
0.844
OMERI06G01780
Oryza meridionalis
OMERI06G01780
N
0.844
OGLUM06G01860
Oryza glumaepatula
OGLUM06G01860
N
0.844
OBART06G01840
Oryza barthii
OBART06G01840
N
0.844
OS06G0130600
Oryza sativa
OS06G0130600
N
0.840
OPUNC06G01720
Oryza punctata
OPUNC06G01720
N
0.840
OB06G11850
Oryza brachyantha
OB06G11850
N
0.837
Traes_4AL_A02408BC8
Triticum aestivum
Traes_4AL_A02408BC8
N
0.830
Sb10g002020
Sorghum bicolor
Sb10g002020
N
0.824
LPERR06G01660
Leersia perrieri
LPERR06G01660
N
0.822
Pavir.J00934
Panicum virgatum
Pavir.J00934
N
0.793
Pavir.Db02349
Panicum virgatum
Pavir.Db02349
N
0.785
GRMZM2G118690
Zea mays
GRMZM2G118690
N
0.765
BRADI1G49980
Brachypodium distachyon
BRADI1G49980
N
0.711