CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0008s0060
(
Salix purpurea
)
BED ZF,C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
PF00096 (zf-C2H2)
IPR003656
IPR007087
SapurV1A.0008s0060
T025124_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0008s0060.1.p
BED ZF
64
95
RGPGYRVCEYCGKEFSSGKAWGGHKRHHLKND
SapurV1A.0008s0060.1.p
C2H2 ZF
146
167
TCCLCGKVFPSMNSLFGHMRFH
SapurV1A.0008s0060.1.p
C2H2 ZF
423
445
FECDKCHKTFPTGQALGGHKRCH
Links
Other
BED ZF,C2H2 ZF
family TFs
Other
Salix purpurea
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0001s23180
Populus trichocarpa
POPTR_0001s23180
N
0.914