CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo3g023180
(
Brassica oleracea
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
Bo3g023180
T025633_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo3g023180.1
BED ZF
18
93
DVGWEYGVLCDARSLDKVKCKLCGKEFSGGVFRMKEHIAHLKGNLSACPVSSKEDQEKCKKAVLEGKNKKNLKRKH
Links
Other
BED ZF
family TFs
Other
Brassica oleracea
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo9g165450
Brassica oleracea
Bo9g165450
N
0.976
Bo04593s010
Brassica oleracea
Bo04593s010
N
0.976
Thhalv10012177m.g
Eutrema salsugineum
Thhalv10012177m.g
N
0.833
Bo6g012210
Brassica oleracea
Bo6g012210
N
0.786
Bo1g098430
Brassica oleracea
Bo1g098430
N
0.762
Bo1g053290
Brassica oleracea
Bo1g053290
N
0.762
Bo3g057400
Brassica oleracea
Bo3g057400
N
0.738
Bo2g025540
Brassica oleracea
Bo2g025540
N
0.718