CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBN02060
(
Caenorhabditis brenneri
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
CBN02060
T025747_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBN02060
BED ZF
139
179
NPCWAYFVRIDDQLVKCRLCTKVVRSACATNMTKHLERHHT
CBN02060
BED ZF
353
393
HPVWAFFKRTGDGNAECIICQGVVKSPCSSNFMRHLMRHHS
Links
Other
BED ZF
family TFs
Other
Caenorhabditis brenneri
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CBG06089
Caenorhabditis briggsae
CBG06089
N
0.988
dpy-20
Caenorhabditis elegans
WBGene00001079
N
0.976
CJA07553
Caenorhabditis japonica
CJA07553
N
0.939
CRE12604
Caenorhabditis remanei
CRE12604
N
0.916
CRE12603
Caenorhabditis remanei
CRE12603
N
0.916
HCOI01785000
Haemonchus contortus
HCOI01785000
N
0.829
ANCCEY_03962
Ancylostoma ceylanicum
ANCCEY_03962
N
0.829