CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh_scip_prom.28083.3952
(
Phytophthora lateralis
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
fgenesh_scip_prom.28083.3952
T026488_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh_scip_prom.28083.3952
BED ZF
75
127
EVEENISAKKREESSIAKCKLCRQQGKLERKTCVRFSKSVTSNLWRHLKENHP
Links
Other
BED ZF
family TFs
Other
Phytophthora lateralis
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Phyra80851
Phytophthora ramorum
Phyra80851
N
1.000
PITG_06347
Phytophthora infestans
PITG_06347
N
0.971
Physo143072
Phytophthora sojae
Physo143072
N
0.944
estExt_fgenesh1_pg.C_2790008
Phytophthora capsici
estExt_fgenesh1_pg.C_2790008
N
0.944
maker-pag1_scaffold_40-snap-gene-0.19
Pythium aphanidermatum
maker-pag1_scaffold_40-snap-gene-0.19
N
0.778
maker-pir_contig_468-snap-gene-0.7
Pythium irregulare
maker-pir_contig_468-snap-gene-0.7
N
0.773
PYU1_G008909
Pythium ultimum
PYU1_G008909
N
0.750
maker-pve_contig_71-fgenesh-gene-0.1
Pythium vexans
maker-pve_contig_71-fgenesh-gene-0.1
N
0.750
ALNC14_094070
Albugo laibachii
ALNC14_094070
N
0.750
fgenesh_scip_prom.46568.6049
Phytophthora kernoviae
fgenesh_scip_prom.46568.6049
N
0.750
maker-piw_contig_2045-snap-gene-0.2
Pythium iwayamai
maker-piw_contig_2045-snap-gene-0.2
N
0.727