CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh_scip_prom.28083.4151
(
Phytophthora lateralis
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
fgenesh_scip_prom.28083.4151
T026489_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh_scip_prom.28083.4151
BED ZF
52
90
AKMYVGRGTSEGIVKCCYCDKEISSRNVDRWASHLRSCV
Links
Other
BED ZF
family TFs
Other
Phytophthora lateralis
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Phyra79196
Phytophthora ramorum
Phyra79196
N
0.923
HpaG804670
Hyaloperonospora arabidopsidis
HpaG804670
N
0.821
maker-piw_contig_8819-snap-gene-0.1
Pythium iwayamai
maker-piw_contig_8819-snap-gene-0.1
N
0.710
snap_masked-pag1_scaffold_127-abinit-gene-0.56
Pythium aphanidermatum
snap_masked-pag1_scaffold_127-abinit-gene-0.56
N
0.706