ONIVA01G21500 (Oryza nivara)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02892 (zf-BED) IPR003656 ONIVA01G21500 T027109_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA01G21500.1 BED ZF 261 306
ONIVA01G21500.1 BED ZF 399 439
ONIVA01G21500.1 BED ZF 591 637
ONIVA01G21500.1 BED ZF 696 741
ONIVA01G21500.2 BED ZF 261 306
ONIVA01G21500.2 BED ZF 399 439
ONIVA01G21500.2 BED ZF 591 637
ONIVA01G21500.2 BED ZF 696 741

Links

Other BED ZF family TFs
Other Oryza nivara TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BGIOSGA001450 Oryza indica BGIOSGA001450 N 1.000
Si000106m.g Setaria italica Si000106m.g N 0.836
Sb03g025310 Sorghum bicolor Sb03g025310 N 0.805
OS01G0547200 Oryza sativa OS01G0547200 N 1.000
ORUFI01G21360 Oryza rufipogon ORUFI01G21360 N 1.000
OPUNC01G19360 Oryza punctata OPUNC01G19360 N 0.964
OLONG_002006 Oryza longistaminata OLONG_002006 N 0.994
OGLUM01G22570 Oryza glumaepatula OGLUM01G22570 N 0.988
OBART01G18970 Oryza barthii OBART01G18970 N 0.994
OB01G28790 Oryza brachyantha OB01G28790 N 0.891
LPERR01G16460 Leersia perrieri LPERR01G16460 N 0.915
Pavir.Eb01543 Panicum virgatum Pavir.Eb01543 N 0.815