CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400025420
(
Solanum tuberosum
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
PGSC0003DMG400025420
T027247_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400065386
BED ZF
5
53
STVWQHFEKNFKNGLLVKAKCLHCKQNYAANTSRNGTSGLKQHLTNRCK
Links
Other
BED ZF
family TFs
Other
Solanum tuberosum
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Solyc01g010610.1
Solanum lycopersicum
Solyc01g010610.1
N
0.864
Solyc11g050940.1
Solanum lycopersicum
Solyc11g050940.1
N
0.814
Solyc04g051430.1
Solanum lycopersicum
Solyc04g051430.1
N
0.767