CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Phyra75461
(
Phytophthora ramorum
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
Phyra75461
T027278_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Phyra75461
BED ZF
29
71
SAVWSYFEKDQSGNSVCKFCERVIKGHHSSNLLSHLRTAGRTD
Links
Other
BED ZF
family TFs
Other
Phytophthora ramorum
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh_scip_prom.28083.1893
Phytophthora lateralis
fgenesh_scip_prom.28083.1893
N
1.000
maker-pve_contig_450-fgenesh-gene-0.9
Pythium vexans
maker-pve_contig_450-fgenesh-gene-0.9
N
0.951
Physo142161
Phytophthora sojae
Physo142161
N
0.927
PYU1_G007526
Pythium ultimum
PYU1_G007526
N
0.902
maker-par_contig_782-fgenesh-gene-0.0
Pythium arrhenomanes
maker-par_contig_782-fgenesh-gene-0.0
N
0.878
fgenesh_scip_prom.46568.3443
Phytophthora kernoviae
fgenesh_scip_prom.46568.3443
N
0.878
ALNC14_092890
Albugo laibachii
ALNC14_092890
N
0.854
maker-piw_contig_1546-fgenesh-gene-0.1
Pythium iwayamai
maker-piw_contig_1546-fgenesh-gene-0.1
N
0.829
fgenesh_masked-pir_contig_606-abinit-gene-0.23
Pythium irregulare
fgenesh_masked-pir_contig_606-abinit-gene-0.23
N
0.805
maker-pag1_scaffold_281-snap-gene-0.12
Pythium aphanidermatum
maker-pag1_scaffold_281-snap-gene-0.12
N
0.780
fgenesh1_pg.C_scaffold_212620000001
Phytophthora capsici
fgenesh1_pg.C_scaffold_212620000001
N
0.707