PPA10390 (Pristionchus pacificus)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02892 (zf-BED) IPR003656 PPA10390 T027430_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PPA10390 BED ZF 24 67

Links

Other BED ZF family TFs
Other Pristionchus pacificus TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
scaffold26-EXSNAP2012.71 Pristionchus exspectatus scaffold26-EXSNAP2012.71 N 1.000
CRE18887 Caenorhabditis remanei CRE18887 N 0.953
T10B5.10 Caenorhabditis elegans WBGene00020396 N 0.953
CJA14938 Caenorhabditis japonica CJA14938 N 0.953
CBN31223 Caenorhabditis brenneri CBN31223 N 0.953
HPLM_0000480901 Haemonchus placei HPLM_0000480901 N 0.929
Hba_17907 Heterorhabditis bacteriophora Hba_17907 N 0.929
ANCCAN_14002 Ancylostoma caninum ANCCAN_14002 N 0.929
ACOC_0000692801 Angiostrongylus costaricensis ACOC_0000692801 N 0.907
TELCIR_22024 Teladorsagia circumcincta TELCIR_22024 N 0.907
SVUK_0000253901 Strongylus vulgaris SVUK_0000253901 N 0.907
HCOI00792700 Haemonchus contortus HCOI00792700 N 0.907
NECAME_03042 Necator americanus NECAME_03042 N 0.907
ANCCEY_01480 Ancylostoma ceylanicum ANCCEY_01480 N 0.907
HPBE_0001360801 Heligmosomoides bakeri HPBE_0001360801 N 0.907
ASU_14749 Ascaris suum ASU_14749 N 0.814
nOo.2.0.1.g00221 Onchocerca ochengi nOo.2.0.1.g00221 N 0.791
nDi.2.2.2.g02557 Dirofilaria immitis nDi.2.2.2.g02557 N 0.791
nLs.2.1.2.g07398 Litomosoides sigmodontis nLs.2.1.2.g07398 N 0.791
TCLT_0000814301 Thelazia callipaeda TCLT_0000814301 N 0.791
EEL_0000772901 Elaeophora elaphi EEL_0000772901 N 0.791
WBGene00243366 Onchocerca volvulus WBGene00243366 N 0.791
Bm5704 Brugia malayi Bm5704 N 0.791
nAv.1.0.1.g00358 Acanthocheilonema viteae nAv.1.0.1.g00358 N 0.791
DME_0000623401 Dracunculus medinensis DME_0000623401 N 0.791
WUBG_00184 Wuchereria bancrofti WUBG_00184 N 0.791
GPUH_0001231601 Gongylonema pulchrum GPUH_0001231601 N 0.791
LOAG_17692 Loa loa LOAG_17692 N 0.767