TCM_027266 (Theobroma cacao)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02892 (zf-BED) IPR003656 TCM_027266 T027755_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EOY25898 BED ZF 40 97

Links

Other BED ZF family TFs
Other Theobroma cacao TFs

76 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PK28412.1 Cannabis sativa PK28412.1 N 0.750
gene31107-v1.0-hybrid Fragaria vesca gene31107-v1.0-hybrid N 0.750
gene30791-v1.0-hybrid Fragaria vesca gene30791-v1.0-hybrid N 0.750
gene15718-v1.0-hybrid Fragaria vesca gene15718-v1.0-hybrid N 0.864
Eucgr.F03885 Eucalyptus grandis Eucgr.F03885 N 0.886
Eucgr.C01383 Eucalyptus grandis Eucgr.C01383 N 0.795
Ciclev10025036m.g Citrus clementina Ciclev10025036m.g N 0.909
Ciclev10007308m.g Citrus clementina Ciclev10007308m.g N 0.795
Carubv10019720m.g Capsella rubella Carubv10019720m.g N 0.795
Cagra.1725s0137 Capsella grandiflora Cagra.1725s0137 N 0.795
Bostr.20129s0513 Boechera stricta Bostr.20129s0513 N 0.773
mgf025287m Mimulus guttatus mgf025287m N 0.795
Cucsa.096030 Cucumis sativus Cucsa.096030 N 0.750
Cucsa.036140 Cucumis sativus Cucsa.036140 N 0.705
cassava11655.m1 Manihot esculenta cassava11655.m1 N 0.886
Pm013703 Prunus mume Pm013703 N 0.773
VIT_11s0016g05750 Vitis vinifera VIT_11s0016g05750 N 0.773
VIT_09s0002g07340 Vitis vinifera VIT_09s0002g07340 N 0.909
Gorai.004G107300 Gossypium raimondii Gorai.004G107300 N 0.750
Gorai.010G137500 Gossypium raimondii Gorai.010G137500 N 1.000
PK27100.1 Cannabis sativa PK27100.1 N 0.795
SapurV1A.0344s0280 Salix purpurea SapurV1A.0344s0280 N 0.886
SapurV1A.0199s0250 Salix purpurea SapurV1A.0199s0250 N 0.886
SapurV1A.0034s0250 Salix purpurea SapurV1A.0034s0250 N 0.773
Pavir.J31170 Panicum virgatum Pavir.J31170 N 0.727
Pavir.J05554 Panicum virgatum Pavir.J05554 N 0.727
Pavir.Ib03527 Panicum virgatum Pavir.Ib03527 N 0.750
Pavir.Ia00683 Panicum virgatum Pavir.Ia00683 N 0.727
Pavir.Eb01402 Panicum virgatum Pavir.Eb01402 N 0.773
Pavir.Eb00997 Panicum virgatum Pavir.Eb00997 N 0.727
Pavir.Eb00995 Panicum virgatum Pavir.Eb00995 N 0.727
Pavir.Ea02468 Panicum virgatum Pavir.Ea02468 N 0.705
orange1.1g005485m.g Citrus sinensis orange1.1g005485m.g N 0.909
orange1.1g002915m.g Citrus sinensis orange1.1g002915m.g N 0.795
MDP0000394762 Malus domestica MDP0000394762 N 0.773
MDP0000197332 Malus domestica MDP0000197332 N 0.727
Lus10032337.g Linum usitatissimum Lus10032337.g N 0.705
Traes_4DS_9C5CECE46 Triticum aestivum Traes_4DS_9C5CECE46 N 0.750
Traes_4DS_990D31BB1 Triticum aestivum Traes_4DS_990D31BB1 N 0.705
PGSC0003DMG400023690 Solanum tuberosum PGSC0003DMG400023690 N 0.705
PGSC0003DMG400019816 Solanum tuberosum PGSC0003DMG400019816 N 0.818
PGSC0003DMG400002911 Solanum tuberosum PGSC0003DMG400002911 N 0.727
OB08G27850 Oryza brachyantha OB08G27850 N 0.750
OB08G27840 Oryza brachyantha OB08G27840 N 0.727
MLOC_75540 Hordeum vulgare MLOC_75540 N 0.705
MLOC_66012 Hordeum vulgare MLOC_66012 N 0.750
GSMUA_Achr8G29120_001 Musa acuminata GSMUA_Achr8G29120_001 N 0.727
GSMUA_Achr3G16690_001 Musa acuminata GSMUA_Achr3G16690_001 N 0.727
GLYMA17G11981 Glycine max GLYMA17G11981 N 0.795
GLYMA13G44351 Glycine max GLYMA13G44351 N 0.705
GLYMA13G22881 Glycine max GLYMA13G22881 N 0.795
GLYMA13G22855 Glycine max GLYMA13G22855 N 0.795
GLYMA07G03280 Glycine max GLYMA07G03280 N 0.795
BRADI3G40810 Brachypodium distachyon BRADI3G40810 N 0.750
BRADI1G09650 Brachypodium distachyon BRADI1G09650 N 0.705
Bo6g067130 Brassica oleracea Bo6g067130 N 0.705
POPTR_0001s20900 Populus trichocarpa POPTR_0001s20900 N 0.886
POPTR_0003s02610 Populus trichocarpa POPTR_0003s02610 N 0.886
Traes_4BS_D5227ED8B Triticum aestivum Traes_4BS_D5227ED8B N 0.705
Traes_4BS_5B1737D7C Triticum aestivum Traes_4BS_5B1737D7C N 0.750
Traes_4AL_A494372EB Triticum aestivum Traes_4AL_A494372EB N 0.750
Traes_4AL_54F25AA7C Triticum aestivum Traes_4AL_54F25AA7C N 0.705
TCM_038144 Theobroma cacao TCM_038144 N 0.750
Solyc12g009640.1 Solanum lycopersicum Solyc12g009640.1 N 0.727
Solyc10g080090.1 Solanum lycopersicum Solyc10g080090.1 N 0.705
Solyc03g116840.1 Solanum lycopersicum Solyc03g116840.1 N 0.818
Si034159m.g Setaria italica Si034159m.g N 0.727
Si000761m.g Setaria italica Si000761m.g N 0.773
Si000431m.g Setaria italica Si000431m.g N 0.727
Sb09g016200 Sorghum bicolor Sb09g016200 N 0.705
Sb02g043380 Sorghum bicolor Sb02g043380 N 0.705
Sb01g009090 Sorghum bicolor Sb01g009090 N 0.727
PRUPE_ppa002495mg Prunus persica PRUPE_ppa002495mg N 0.773
PRUPE_ppa001983mg Prunus persica PRUPE_ppa001983mg N 0.818
POPTR_0018s12690 Populus trichocarpa POPTR_0018s12690 N 0.773
Bo4g107870 Brassica oleracea Bo4g107870 N 0.773