CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSP00000370620-D1
(
Bos grunniens
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
ENSP00000370620-D1
T027992_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZBED1
M02771_2.00
Homo sapiens
HTRTCGCGACATR
YATGTCGCGAYAD
SELEX
Jolma et al.(2013)
ZBED1_1
0.977
0.977
ZBED1
M04056_2.00
Homo sapiens
VTRTCGCGAYAT
ATRTCGCGAYAB
SELEX
Yin et al.(2017)
ZBED1_eDBD_HT-SELEX
0.977
0.977
ZBED1
M09776_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DREF_01
0.977
0.977
ZBED1
M04057_2.00
Homo sapiens
MTRTCGCGAYAK
MTRTCGCGAYAK
SELEX
Yin et al.(2017)
ZBED1_eDBD_Methyl-HT-SELEX
0.977
0.977
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSP00000370620-D1
BED ZF
23
72
SKVWRYFGFDTNAEGCILQWKKIYCRICMAQIAYSGNTSNLSYHLEKNHP
Links
Other
BED ZF
family TFs
Other
Bos grunniens
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy