CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000268590
(
Malus domestica
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
MDP0000268590
T028392_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000268590
BED ZF
121
168
DPGWAHGIMVNGGRQKIKCKYCHKVMLGGGISRLKQHLAGERGNVAPC
Links
Other
BED ZF
family TFs
Other
Malus domestica
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla013871
Citrullus lanatus
Cla013871
N
0.976
30226.m002048
Ricinus communis
30226.m002048
N
0.929
SapurV1A.0070s0660
Salix purpurea
SapurV1A.0070s0660
N
0.884
GSMUA_Achr9G10360_001
Musa acuminata
GSMUA_Achr9G10360_001
N
0.850
GSMUA_Achr2G17360_001
Musa acuminata
GSMUA_Achr2G17360_001
N
0.810
PDK_20s1384951g001
Phoenix dactylifera
PDK_20s1384951g001
N
0.800