CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Fa02231
(
Panicum virgatum
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
Pavir.Fa02231
T028486_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Fa02231.1.p
BED ZF
22
69
SAVWEHFTRFTDDDGKDRARCKRCLAALGAGTRNGTSTLWGHVKICCR
Pavir.Fa02231.2.p
BED ZF
22
69
SAVWEHFTRFTDDDGKDRARCKRCLAALGAGTRNGTSTLWGHVKICCR
Pavir.Fa02231.3.p
BED ZF
22
69
SAVWEHFTRFTDDDGKDRARCKRCLAALGAGTRNGTSTLWGHVKICCR
Links
Other
BED ZF
family TFs
Other
Panicum virgatum
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.J13902
Panicum virgatum
Pavir.J13902
N
0.721
Pavir.Fb00177
Panicum virgatum
Pavir.Fb00177
N
0.705