CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SapurV1A.0580s0110
(
Salix purpurea
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
SapurV1A.0580s0110
T028676_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0580s0110.1.p
BED ZF
58
105
SQIWDHFTKLDCDPNKPRAACNYCRRDYACHTILNGTSNMWSHLKVCK
Links
Other
BED ZF
family TFs
Other
Salix purpurea
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SapurV1A.0623s0050
Salix purpurea
SapurV1A.0623s0050
N
0.952
SapurV1A.0885s0040
Salix purpurea
SapurV1A.0885s0040
N
0.952
SapurV1A.0599s0080
Salix purpurea
SapurV1A.0599s0080
N
0.952
SapurV1A.0416s0010
Salix purpurea
SapurV1A.0416s0010
N
0.929
SapurV1A.1091s0040
Salix purpurea
SapurV1A.1091s0040
N
0.929
POPTR_0001s40220
Populus trichocarpa
POPTR_0001s40220
N
0.833
XM_002336930.1
Populus trichocarpa
POPTR_0001s22360
N
0.829
POPTR_0008s22220
Populus trichocarpa
POPTR_0008s22220
N
0.829
POPTR_0006s13090
Populus trichocarpa
POPTR_0006s13090
N
0.829
POPTR_0001s40170
Populus trichocarpa
POPTR_0001s40170
N
0.810
SapurV1A.0498s0210
Salix purpurea
SapurV1A.0498s0210
N
0.786
POPTR_0007s00640
Populus trichocarpa
POPTR_0007s00640
N
0.784
POPTR_0012s05700
Populus trichocarpa
POPTR_0012s05700
N
0.780
SapurV1A.0089s0710
Salix purpurea
SapurV1A.0089s0710
N
0.756
SapurV1A.0449s0030
Salix purpurea
SapurV1A.0449s0030
N
0.732
POPTR_0001s18450
Populus trichocarpa
POPTR_0001s18450
N
0.727