CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
LCUP013792
(
Lucilia cuprina
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
LCUP013792
T028772_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Dref
M05901_2.00
Drosophila melanogaster
YBWTCGATAWNW
WNWTATCGAWVR
B1H
Zhu et al.(2011)
Dref_FlyReg_FBgn0015664
0.886
0.886
Dref
M09778_2.00
Drosophila melanogaster
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$DREF_Q3
0.886
0.886
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LCUP013792-PA
BED ZF
32
81
SVYWRHFGFPTNEDNCIITKQNVVCLICHKVLTNHGNTTNLRAHLQYRHK
Links
Other
BED ZF
family TFs
Other
Lucilia cuprina
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MDOA009246
Musca domestica
MDOA009246
I
0.909
GM12069
Drosophila sechellia
FBgn0167010
I
0.886
GD22316
Drosophila simulans
FBgn0193723
I
0.886
Dref
Drosophila yakuba
FBgn0227964
I
0.886
GL19191
Drosophila persimilis
FBgn0156790
I
0.886
GK14535
Drosophila willistoni
FBgn0216541
I
0.886
Dref
Drosophila mojavensis
FBgn0133715
I
0.886
Dref
Drosophila pseudoobscura
FBgn0079166
I
0.886
Dref
Drosophila virilis
FBgn0025845
I
0.886
Dref
Drosophila ananassae
FBgn0091170
I
0.886
GG23986
Drosophila erecta
FBgn0116125
I
0.886
Dref
Drosophila melanogaster
FBgn0015664
D
0.886
GH10661
Drosophila grimshawi
FBgn0118142
I
0.864